RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ALOXE3Q9BYJ1 711 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 CPSF2Q9P2I0 782 aaKnown RBP14.03□□□□□ -0.16
UBXN4-203ENST00000416538 VTI1BQ9UEU0 232 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 ENTPD4Q9Y227 616 aa14.03□□□□□ -0.16
UBXN4-203ENST00000416538 WASHC1A8K0Z3 465 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 HRKO00198 91 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 ADAM10O14672 748 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 EEDO75530 441 aaKnown RBP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 IFNA16P05015 189 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 GFAPP14136 432 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 EPB42P16452 691 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 HPDP32754 393 aaPredicted RBP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 ALDH18A1P54886 795 aaKnown RBP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 RPS13P62277 151 aaKnown RBP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 TGM3Q08188 693 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 PCBP2Q15366 365 aaKnown RBP eCLIP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 HIST2H2ACQ16777 129 aaPredicted RBP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 TMEM35AQ53FP2 167 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 CMPK2Q5EBM0 449 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 DEPDC1Q5TB30 811 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 C18orf63Q68DL7 685 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 HIST2H2AA3Q6FI13 130 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 C3P1Q6ZMU1 363 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 MRGPRGQ86SM5 289 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 MYLK4Q86YV6 388 aaPredicted RBP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 TICAM1Q8IUC6 712 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 SPPL2CQ8IUH8 684 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 FAM98AQ8NCA5 519 aaKnown RBP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 OR52B6Q8NGF0 335 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 ZNF721Q8TF20 911 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 UCN3Q969E3 161 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 CMTM7Q96FZ5 175 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 NSUN5Q96P11 429 aaKnown RBP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 CDK15Q96Q40 435 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 RASL10BQ96S79 203 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 OR8D2Q9GZM6 311 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 MYOTQ9UBF9 498 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 KLF13Q9Y2Y9 288 aaPredicted RBP14.02□□□□□ -0.17
UBXN4-203ENST00000416538 RNF11Q9Y3C5 154 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 TSC22D4Q9Y3Q8 395 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 ATG4BQ9Y4P1 393 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 ARHGAP21Q5T5U3 1957 aa14.02□□□□□ -0.17
UBXN4-203ENST00000416538 INTS1Q8N201 2190 aaKnown RBP14.01□□□□□ -0.17
UBXN4-203ENST00000416538 A0A0A6YYD5 115 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 A0A1B0GTL3 188 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 A0A1W2PS29 197 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 SYCE1LA8MT33 242 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 C17orf105B2RV13 164 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 WWP2O00308 870 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 CDK2AP1O14519 115 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 OR7A17O14581 309 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 PEX1O43933 1283 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 TMPRSS11DO60235 418 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 HS6ST1O60243 411 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 ZFAND5O76080 213 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 TYK2P29597 1187 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 BSGP35613 385 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 SSR4P51571 173 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 TNFRSF17Q02223 184 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 RBPJQ06330 500 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 ART3Q13508 389 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 GTF2H2Q13888 395 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 ACAP2Q15057 778 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 FAM83EQ2M2I3 478 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.01□□□□□ -0.17
UBXN4-203ENST00000416538 KRTCAP3Q53RY4 240 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 OR4C11Q6IEV9 310 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 MRM1Q6IN84 353 aaKnown RBP14.01□□□□□ -0.17
UBXN4-203ENST00000416538 GTF2H2CQ6P1K8 395 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 RPS27LQ71UM5 84 aaKnown RBP14.01□□□□□ -0.17
UBXN4-203ENST00000416538 GHDCQ8N2G8 530 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 TMEM132CQ8N3T6 1108 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 ZNF808Q8N4W9 903 aaPredicted RBP14.01□□□□□ -0.17
UBXN4-203ENST00000416538 TMEM156Q8N614 296 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 PTGR2Q8N8N7 351 aaPredicted RBP14.01□□□□□ -0.17
UBXN4-203ENST00000416538 ZFP62Q8NB50 900 aaPredicted RBP14.01□□□□□ -0.17
UBXN4-203ENST00000416538 PSD4Q8NDX1 1056 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 SRFBP1Q8NEF9 429 aaKnown RBP14.01□□□□□ -0.17
UBXN4-203ENST00000416538 OR14A16Q8NHC5 309 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 C16orf52Q8NHV5 167 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 WDR20Q8TBZ3 569 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 UBE2E3Q969T4 207 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 TMEM125Q96AQ2 219 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 PAFAH2Q99487 392 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 ROGDIQ9GZN7 287 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 VPS11Q9H270 941 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 ACTR8Q9H981 624 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 ZBTB26Q9HCK0 441 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 XPR1Q9UBH6 696 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 SUCOQ9UBS9 1254 aaKnown RBP14.01□□□□□ -0.17
UBXN4-203ENST00000416538 MEMO1Q9Y316 297 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 HRH3Q9Y5N1 445 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 CLCA3PQ9Y6N3 262 aa14.01□□□□□ -0.17
UBXN4-203ENST00000416538 G3V3Y1 287 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 H0YIV9 168 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 C19orf84I3L1E1 186 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 IGKV3-11P04433 115 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 SBK3P0C264 359 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 CPN2P22792 545 aa14□□□□□ -0.17
UBXN4-203ENST00000416538 SERPINB1P30740 379 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms