RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 PCDHGA8Q9Y5G5 932 aa13.44□□□□□ -0.26
SF3B1-204ENST00000414963 IGLV3-12A0A075B6K2 115 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 PRSS51A0A1B0GVH4 220 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 AGRPO00253 132 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 MEN1O00255 615 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 RNASET2O00584 256 aaKnown RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 ANGPT2O15123 496 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 UNC5CO95185 931 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 NPPAP01160 153 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 NTRK1P04629 796 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 FBLP22087 321 aaKnown RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 OR1D4P47884 311 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 ALDH9A1P49189 494 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 PCBP4P57723 403 aaKnown RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 DCDP81605 110 aaKnown RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 SHC2P98077 582 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 MAT1AQ00266 395 aaKnown RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 ACTN3Q08043 901 aaPredicted RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 CEBPEQ15744 281 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 MPEG1Q2M385 716 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 TIGD2Q4W5G0 525 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 ANKRD26P1Q6NSI1 321 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 SAMD14Q8IZD0 417 aaPredicted RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 VPS37AQ8NEZ2 397 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 DNAJB8Q8NHS0 232 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 UCN3Q969E3 161 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 COL26A1Q96A83 441 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 TBC1D20Q96BZ9 403 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 CLIP3Q96DZ5 547 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 ZNF681Q96N22 645 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 CSF3RQ99062 836 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 TGIF2Q9GZN2 237 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 EFCAB1Q9HAE3 211 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 MKKSQ9NPJ1 570 aaPredicted RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 SLC35C2Q9NQQ7 365 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 ACSS1Q9NUB1 689 aaPredicted RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 MAP10Q9P2G4 905 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 PISDQ9UG56 409 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 BTNL2Q9UIR0 455 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 LEF1Q9UJU2 399 aaPredicted RBP13.43□□□□□ -0.26
SF3B1-204ENST00000414963 MAN2B2Q9Y2E5 1009 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 B3GALT1Q9Y5Z6 326 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 MAU2Q9Y6X3 613 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 SPTBP11277 2137 aa13.43□□□□□ -0.26
SF3B1-204ENST00000414963 WASHC1A8K0Z3 465 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 MYO1GB0I1T2 1018 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 FAM227AF5H4B4 570 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 CLDN4O14493 209 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 CTNSO60931 367 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 ALBP02768 609 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 FHP07954 510 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 ZNF28P17035 718 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 PPP2R1BP30154 601 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 TRPC1P48995 793 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 MAPK10P53779 464 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 HSD17B7P56937 341 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 MLC1Q15049 377 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 MAPKAPK3Q16644 382 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 SYT16Q17RD7 645 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 TMEM164Q5U3C3 297 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 OR4F3Q6IEY1 312 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 HACD2Q6Y1H2 254 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 ZNF517Q6ZMY9 492 aaPredicted RBP13.42□□□□□ -0.26
SF3B1-204ENST00000414963 COX15Q7KZN9 410 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 OVCH1Q7RTY7 1134 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 RETREG3Q86VR2 466 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 SHISA5Q8N114 240 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 METTL27Q8N6F8 245 aaPredicted RBP13.42□□□□□ -0.26
SF3B1-204ENST00000414963 PCYOX1LQ8NBM8 494 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 C7orf57Q8NEG2 295 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 OR4K14Q8NGD5 310 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 GTF2H4Q92759 462 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 PMEPA1Q969W9 287 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 PEX11GQ96HA9 241 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 ITCHQ96J02 903 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 CCDC115Q96NT0 180 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 ULBP3Q9BZM4 244 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 C1orf21Q9H246 121 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 SLC26A1Q9H2B4 701 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 RMND5AQ9H871 391 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 SERHLQ9NQF3 203 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 LANCL2Q9NS86 450 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 TRPC4Q9UBN4 977 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 UTS2RQ9UKP6 389 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 SATB2Q9UPW6 733 aa13.42□□□□□ -0.26
SF3B1-204ENST00000414963 MRPS33Q9Y291 106 aaKnown RBP13.42□□□□□ -0.26
SF3B1-204ENST00000414963 DMXL1Q9Y485 3027 aa13.41□□□□□ -0.26
SF3B1-204ENST00000414963 CNOT1A5YKK6 2376 aaKnown RBP13.41□□□□□ -0.26
SF3B1-204ENST00000414963 PMS2P1A4D2B8 440 aa13.41□□□□□ -0.26
SF3B1-204ENST00000414963 GLOD5A6NK44 160 aa13.41□□□□□ -0.26
SF3B1-204ENST00000414963 C9orf172C9J069 976 aa13.41□□□□□ -0.26
SF3B1-204ENST00000414963 NVLO15381 856 aaKnown RBP13.41□□□□□ -0.26
SF3B1-204ENST00000414963 PDPK1O15530 556 aa13.41□□□□□ -0.26
SF3B1-204ENST00000414963 PRKRAO75569 313 aaKnown RBP13.41□□□□□ -0.26
SF3B1-204ENST00000414963 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
SF3B1-204ENST00000414963 BMP10O95393 424 aa13.41□□□□□ -0.26
SF3B1-204ENST00000414963 GPR75O95800 540 aa13.41□□□□□ -0.26
SF3B1-204ENST00000414963 KLK3P07288 261 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms