RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 GALNT18Q6P9A2 607 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 C1orf52Q8N6N3 182 aaKnown RBP13.73□□□□□ -0.21
LIMS1-206ENST00000414829 ANKRD42Q8N9B4 389 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 OR14A16Q8NHC5 309 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 ART5Q96L15 291 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 ATP6V1G3Q96LB4 118 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 IMMP1LQ96LU5 166 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 KCNA7Q96RP8 456 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 CSF3RQ99062 836 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 HBEGFQ99075 208 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 SORBS1Q9BX66 1292 aaKnown RBP13.73□□□□□ -0.21
LIMS1-206ENST00000414829 RYDENQ9NUL5 291 aaKnown RBP13.73□□□□□ -0.21
LIMS1-206ENST00000414829 SIRT5Q9NXA8 310 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 PSME2Q9UL46 239 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 TP53TG5Q9Y2B4 290 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 ATG4BQ9Y4P1 393 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 HEMK1Q9Y5R4 338 aaPredicted RBP13.73□□□□□ -0.21
LIMS1-206ENST00000414829 CLCA3PQ9Y6N3 262 aa13.73□□□□□ -0.21
LIMS1-206ENST00000414829 GNG14A0A1W2PPG7 69 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 C1orf226A1L170 272 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 NPIPB8E9PQR5 432 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 TMPRSS11DO60235 418 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 PCDH7O60245 1069 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 DNAJB6O75190 326 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 AIFM1O95831 613 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 IFNA16P05015 189 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 DDX5P17844 614 aaKnown RBP13.72□□□□□ -0.21
LIMS1-206ENST00000414829 TPP2P29144 1249 aaPredicted RBP13.72□□□□□ -0.21
LIMS1-206ENST00000414829 TIA1P31483 386 aaKnown RBP eCLIP13.72□□□□□ -0.21
LIMS1-206ENST00000414829 HTR6P50406 440 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 FOXA1P55317 472 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 HNRNPH2P55795 449 aaKnown RBP13.72□□□□□ -0.21
LIMS1-206ENST00000414829 SLC26A5P58743 744 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 BTG2P78543 158 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 HEPACAMQ14CZ8 416 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 SOWAHCQ53LP3 525 aaPredicted RBP13.72□□□□□ -0.21
LIMS1-206ENST00000414829 TCHHL1Q5QJ38 904 aaPredicted RBP13.72□□□□□ -0.21
LIMS1-206ENST00000414829 SH2D4BQ5SQS7 431 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 NDUFAF5Q5TEU4 345 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 C6orf163Q5TEZ5 329 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 ATG16L1Q676U5 607 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 ISLR2Q6UXK2 745 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 ZCCHC23Q6ZST2 131 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 LGI4Q8N135 537 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 CHTF18Q8WVB6 975 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 DGAT2Q96PD7 388 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 PAIP2Q9BPZ3 127 aaKnown RBP13.72□□□□□ -0.21
LIMS1-206ENST00000414829 NUDT9Q9BW91 350 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 NECTIN3Q9NQS3 549 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.72□□□□□ -0.21
LIMS1-206ENST00000414829 VTI1BQ9UEU0 232 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 ANAPC2Q9UJX6 822 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.72□□□□□ -0.21
LIMS1-206ENST00000414829 TMED5Q9Y3A6 229 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 TRAF6Q9Y4K3 522 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 ASB4Q9Y574 426 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 ITPR1Q14643 2758 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 MGAQ8IWI9 3026 aa13.72□□□□□ -0.21
LIMS1-206ENST00000414829 OR10H2O60403 315 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 CHRNGP07510 517 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 DRD2P14416 443 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 PRPH2P23942 346 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 EFNA3P52797 238 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 ABCE1P61221 599 aaKnown RBP13.71□□□□□ -0.21
LIMS1-206ENST00000414829 IGLV3-21P80748 117 aaPredicted RBP13.71□□□□□ -0.21
LIMS1-206ENST00000414829 HMGCS1Q01581 520 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 ZNF763Q0D2J5 394 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 KLRB1Q12918 225 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 ABHD17BQ5VST6 288 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 CLEC6AQ6EIG7 209 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 IGFL3Q6UXB1 125 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 IKBIPQ70UQ0 350 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 CLNKQ7Z7G1 428 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 DDIASQ8IXT1 998 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 ZADH2Q8N4Q0 377 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 TEX19Q8NA77 164 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 MORN4Q8NDC4 146 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 B3GNT7Q8NFL0 401 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 OR6Y1Q8NGX8 325 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 TWIST2Q8WVJ9 160 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 VMP1Q96GC9 406 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 RBM18Q96H35 190 aaKnown RBP13.71□□□□□ -0.21
LIMS1-206ENST00000414829 LMF1Q96S06 567 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 SH3GL2Q99962 352 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 WDR77Q9BQA1 342 aaPredicted RBP13.71□□□□□ -0.21
LIMS1-206ENST00000414829 ALOXE3Q9BYJ1 711 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 ILKAPQ9H0C8 392 aaPredicted RBP13.71□□□□□ -0.21
LIMS1-206ENST00000414829 ZNF552Q9H707 407 aaPredicted RBP13.71□□□□□ -0.21
LIMS1-206ENST00000414829 PNO1Q9NRX1 252 aaKnown RBP13.71□□□□□ -0.21
LIMS1-206ENST00000414829 GIMAP4Q9NUV9 329 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 C1orf109Q9NX04 203 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 COPS7AQ9UBW8 275 aa13.71□□□□□ -0.21
LIMS1-206ENST00000414829 PPIEQ9UNP9 301 aaKnown RBP13.71□□□□□ -0.21
LIMS1-206ENST00000414829 IGHV3-20A0A0C4DH32 117 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 A0A1W2PR48 441 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 DYTNA2CJ06 578 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 GPR75O95800 540 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 GBAP04062 536 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms