RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 MAPK12P53778 367 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 TLE1Q04724 770 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 SLC6A19Q695T7 634 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 ATCAYQ86WG3 371 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 C10orf107Q8IVU9 208 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 SHISA5Q8N114 240 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 LGI4Q8N135 537 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 HORMAD2Q8N7B1 307 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 MORN4Q8NDC4 146 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 AGAP11Q8TF27 550 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 HAS2Q92819 552 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 VMP1Q96GC9 406 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 ART5Q96L15 291 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 DGAT2Q96PD7 388 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 ZIM3Q96PE6 472 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 FAIM2Q9BWQ8 316 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 RNF32Q9H0A6 362 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHD1-202ENST00000414220 SSU72Q9NP77 194 aaKnown RBP13.77□□□□□ -0.21
CHD1-202ENST00000414220 RRAGDQ9NQL2 400 aaPredicted RBP13.77□□□□□ -0.21
CHD1-202ENST00000414220 VTI1BQ9UEU0 232 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 PSME2Q9UL46 239 aa13.77□□□□□ -0.21
CHD1-202ENST00000414220 FCHO1O14526 889 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 LDB3O75112 727 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 EEDO75530 441 aaKnown RBP13.76□□□□□ -0.21
CHD1-202ENST00000414220 CELA2AP08217 269 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 UROSP10746 265 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 PLA2G2AP14555 144 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 SOX11P35716 441 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 SERPINB5P36952 375 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 TRA2BP62995 288 aaKnown RBP13.76□□□□□ -0.21
CHD1-202ENST00000414220 PLIN5Q00G26 463 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 SPIN4Q56A73 249 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 ACER2Q5QJU3 275 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 C6orf163Q5TEZ5 329 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 B3GNTL1Q67FW5 361 aaPredicted RBP13.76□□□□□ -0.21
CHD1-202ENST00000414220 OR52E8Q6IFG1 317 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 MRM1Q6IN84 353 aaKnown RBP13.76□□□□□ -0.21
CHD1-202ENST00000414220 H3F3CQ6NXT2 135 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 Q6ZS92 163 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 RPS19BP1Q86WX3 136 aaKnown RBP13.76□□□□□ -0.21
CHD1-202ENST00000414220 PPP1R14CQ8TAE6 165 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 ELP5Q8TE02 316 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 PSMF1Q92530 271 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 MRPL1Q9BYD6 325 aaKnown RBP13.76□□□□□ -0.21
CHD1-202ENST00000414220 EPN3Q9H201 632 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 FARSBQ9NSD9 589 aaKnown RBP13.76□□□□□ -0.21
CHD1-202ENST00000414220 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHD1-202ENST00000414220 MAP10Q9P2G4 905 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 COPS7AQ9UBW8 275 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 ZNF225Q9UK10 706 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 ATG4BQ9Y4P1 393 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 ASB4Q9Y574 426 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 ACTL7BQ9Y614 415 aa13.76□□□□□ -0.21
CHD1-202ENST00000414220 MED13Q9UHV7 2174 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 TRAV17A0A0B4J275 112 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 A0A1B0GTL3 188 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 SERTM1A2A2V5 107 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 C17orf105B2RV13 164 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 OR10H2O60403 315 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 NPHS1O60500 1241 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 ZFAND5O76080 213 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 GPR75O95800 540 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 NEFHP12036 1026 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 PIK3R1P27986 724 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 HNRNPFP52597 415 aaKnown RBP13.75□□□□□ -0.21
CHD1-202ENST00000414220 HNRNPH2P55795 449 aaKnown RBP13.75□□□□□ -0.21
CHD1-202ENST00000414220 ACSM2AQ08AH3 577 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 ZNF169Q14929 603 aaPredicted RBP13.75□□□□□ -0.21
CHD1-202ENST00000414220 PCLAFQ15004 111 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 PLEKHN1Q494U1 663 aaPredicted RBP13.75□□□□□ -0.21
CHD1-202ENST00000414220 SPDYAQ5MJ70 313 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 ACSM2BQ68CK6 577 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 COMMD6Q7Z4G1 85 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 TMEM52Q8NDY8 209 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 CPT1CQ8TCG5 803 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 PGM2Q96G03 612 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 UTP23Q9BRU9 249 aaKnown RBP13.75□□□□□ -0.21
CHD1-202ENST00000414220 ZNF717Q9BY31 904 aaPredicted RBP13.75□□□□□ -0.21
CHD1-202ENST00000414220 C12orf65Q9H3J6 166 aaKnown RBP13.75□□□□□ -0.21
CHD1-202ENST00000414220 ZBTB20Q9HC78 741 aaPredicted RBP13.75□□□□□ -0.21
CHD1-202ENST00000414220 KCNK9Q9NPC2 374 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 PFDN4Q9NQP4 134 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 AGPAT4Q9NRZ5 378 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 ARGLU1Q9NWB6 273 aaPredicted RBP13.75□□□□□ -0.21
CHD1-202ENST00000414220 TIMM22Q9Y584 194 aa13.75□□□□□ -0.21
CHD1-202ENST00000414220 ATRXP46100 2492 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 PCSK5Q92824 1860 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 TRBV11-1A0A0K0K1C0 115 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 GNG14A0A1W2PPG7 69 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 C1orf226A1L170 272 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 OR5H15A6NDH6 313 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 SLC28A1O00337 649 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 AZIN1O14977 448 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 TM9SF1O15321 606 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 TMPRSS11DO60235 418 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 VPS4BO75351 444 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 GBAP04062 536 aa13.74□□□□□ -0.21
CHD1-202ENST00000414220 ALOX15P16050 662 aaPredicted RBP13.74□□□□□ -0.21
CHD1-202ENST00000414220 TPP2P29144 1249 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms