RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 NTRK2Q16620 822 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 CYBRD1Q53TN4 286 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 LY6G5CQ5SRR4 150 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 OR2T5Q6IEZ7 315 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 BEND5Q7L4P6 421 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 FOXRED2Q8IWF2 684 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 TCTE3Q8IZS6 198 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 MINDY1Q8N5J2 469 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ZNF454Q8N9F8 522 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 OR2T29Q8NH02 315 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 LRRC46Q96FV0 321 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 SLC38A2Q96QD8 506 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 MGLLQ99685 303 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 NKX6-2Q9C056 277 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 OR2AG1Q9H205 316 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ZNF768Q9H5H4 540 aaKnown RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 IL23AQ9NPF7 189 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 SPHK1Q9NYA1 384 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 STUB1Q9UNE7 303 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 SPIN1Q9Y657 262 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 CCDC88AQ3V6T2 1871 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 TTC24A2A3L6 582 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 FAM234BA2RU67 622 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 OR51F1A6NGY5 319 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 BHMG1C9JSJ3 638 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 RAF1P04049 648 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 RLN2P04090 185 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 C8GP07360 202 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 TYRP14679 529 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 KIR3DL1P43629 444 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ZNF460Q14592 562 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ADPRMQ3LIE5 342 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 USP39Q53GS9 565 aaKnown RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 C10orf62Q5T681 223 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 PAMR1Q6UXH9 720 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 GDPGP1Q6ZNW5 385 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 PAQR7Q86WK9 346 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 DCAF4L2Q8NA75 395 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 OR4C6Q8NH72 309 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 OVCA2Q8WZ82 227 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ZNF471Q9BX82 626 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 OR51J1Q9H342 316 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 TEX13CA0A0J9YWL9 993 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 TMX2-CTNND1H3BSU7 103 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 SCAMP1O15126 338 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 PRAMEF2O60811 474 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 CD63P08962 238 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ALPIP09923 528 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 HTR1EP28566 365 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 CMPK1P30085 196 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ASMTP46597 345 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 CTBP2P56545 445 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 MTPNP58546 118 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 CXCR4P61073 352 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 KLF1Q13351 362 aaPredicted RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 GRIN2CQ14957 1233 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 YIF1BQ5BJH7 314 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 RABL3Q5HYI8 236 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ALKBH2Q6NS38 261 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 HSDL2Q6YN16 418 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 SPRED1Q7Z699 444 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 AMZ2Q86W34 360 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 RNF130Q86XS8 419 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 BEST4Q8NFU0 473 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 TSTD1Q8NFU3 115 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 TSPEARQ8WU66 669 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 HMGB4Q8WW32 186 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 PIGKQ92643 395 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 BADQ92934 168 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 SLAMF7Q9NQ25 335 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 IL36AQ9UHA7 158 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 SCP2D1Q9UJQ7 156 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 PKD1L3Q7Z443 1732 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 A0A1W2PP18 115 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 FAM86C2PA6NEL3 165 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 LEUTXA8MZ59 168 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 LEFTY2O00292 366 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 JUNP05412 331 aaKnown RBP8.18□□□□□ -1.1
PBRM1-209ENST00000412587 JUNDP17535 347 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 RGS19P49795 217 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 NUDT6P53370 316 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 GHRHRQ02643 423 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 SIRPB2Q5JXA9 342 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 C1orf220Q5T0J3 134 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 C9orf64Q5T6V5 341 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 PRAMEF13Q5VWM6 474 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 SHEQ5VZ18 495 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 MED27Q6P2C8 311 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 C15orf39Q6ZRI6 1047 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ADGRG3Q86Y34 549 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 IL17RDQ8NFM7 739 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 OR9I1Q8NGQ6 314 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 PTPN18Q99952 460 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 PAAF1Q9BRP4 392 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 DHRS4Q9BTZ2 278 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 PDLIM7Q9NR12 457 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 MGAT4CQ9UBM8 478 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 POLR1DQ9Y2S0 133 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 ASB4Q9Y574 426 aa8.18□□□□□ -1.1
PBRM1-209ENST00000412587 MBLAC1A4D2B0 266 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms