RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TRAP1Q12931 704 aaKnown RBP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 BNIP2Q12982 314 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 CYP51A1Q16850 503 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 RCBTB1Q8NDN9 531 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 JADE3Q92613 823 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 ATOH1Q92858 354 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 LOXL4Q96JB6 756 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 BBS4Q96RK4 519 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 RBCK1Q9BYM8 510 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 DCLRE1BQ9H816 532 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 SLC35C2Q9NQQ7 365 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 TAS2R9Q9NYW1 312 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 ZNF282Q9UDV7 671 aaPredicted RBP11.77□□□□□ -0.53
CHMP3-204ENST00000409727 DAPP1Q9UN19 280 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 UNC13CQ8NB66 2214 aa11.77□□□□□ -0.53
CHMP3-204ENST00000409727 MYOCOSA0A1B0GUC4 107 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 HYKKA2RU49 373 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 FAM227AF5H4B4 570 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 TXNDC9O14530 226 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 GSTA4O15217 222 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 FOLR1P15328 257 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 PNLIPP16233 465 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 DDX5P17844 614 aaKnown RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 NTSP30990 170 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 CHI3L1P36222 383 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 PCBP4P57723 403 aaKnown RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 SHC2P98077 582 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 LRRC74AQ0VAA2 488 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 SPIDRQ14159 915 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 PRTGQ2VWP7 1150 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 PRAMEF17Q5VTA0 474 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 SLC48A1Q6P1K1 146 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 ZNF574Q6ZN55 896 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 SZRD1Q7Z422 152 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 OR4N5Q8IXE1 308 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 CCDC116Q8IYX3 515 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 TRIML2Q8N7C3 387 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 ZFP90Q8TF47 636 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 FIG4Q92562 907 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 NAT6Q93015 286 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 ZBED6CLQ96FA7 236 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 MAGED4Q96JG8 741 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 C10orf90Q96M02 699 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 DPH2Q9BQC3 489 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 CXorf36Q9H7Y0 433 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 S100A14Q9HCY8 104 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 EHD3Q9NZN3 535 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 KCMF1Q9P0J7 381 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 HCN3Q9P1Z3 774 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 BCAP29Q9UHQ4 241 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 PHF11Q9UIL8 331 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 ENTPD4Q9Y227 616 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 PCDHGA5Q9Y5G8 931 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 SLC22A7Q9Y694 548 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 V9GYQ6 96 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 TBX19O60806 448 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 OR2B3O76000 313 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 CPNE6O95741 557 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 LMNAP02545 664 aaKnown RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 CKMT1AP12532 417 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 HTR1EP28566 365 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 GPC1P35052 558 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 CDK9P50750 372 aaKnown RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 AP2B1P63010 937 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 ID2Q02363 134 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 DUSP2Q05923 314 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 SF3A2Q15428 464 aaKnown RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 NDUFA9Q16795 377 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 PROX2Q3B8N5 592 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 SPDYE7PQ495Y7 208 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 SPATS1Q496A3 300 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 TMEM71Q6P5X7 295 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 CA13Q8N1Q1 262 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 ARHGEF39Q8N4T4 335 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 TTC29Q8NA56 475 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 GOT1L1Q8NHS2 421 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 OR5P2Q8WZ92 322 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 NCLNQ969V3 563 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 CNRIP1Q96F85 164 aaPredicted RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 TRIM4Q9C037 500 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 LRRN3Q9H3W5 708 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 GLIPR2Q9H4G4 154 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 RPF2Q9H7B2 306 aaKnown RBP11.76□□□□□ -0.53
CHMP3-204ENST00000409727 CES1P1Q9UKY3 287 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 MAP4K5Q9Y4K4 846 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 PCDHB3Q9Y5E6 796 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 SNX13Q9Y5W8 968 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 ZNF780BQ9Y6R6 833 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 FRYLO94915 3013 aa11.76□□□□□ -0.53
CHMP3-204ENST00000409727 FKBP6O75344 327 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 NUDT7P0C024 238 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 ZCCHC18P0CG32 403 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 TLX1P31314 330 aaPredicted RBP11.75□□□□□ -0.53
CHMP3-204ENST00000409727 CRATP43155 626 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 HNRNPFP52597 415 aaKnown RBP11.75□□□□□ -0.53
CHMP3-204ENST00000409727 MAT1AQ00266 395 aaKnown RBP11.75□□□□□ -0.53
CHMP3-204ENST00000409727 SYT16Q17RD7 645 aa11.75□□□□□ -0.53
CHMP3-204ENST00000409727 TCTE1Q5JU00 501 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms