RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CDK9P50750 372 aaKnown RBP17.96■□□□□ 0.47
USP39-202ENST00000409025 CRYBA2P53672 197 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 SELENOWP63302 87 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 RELAQ04206 551 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 EEF1A2Q05639 463 aaKnown RBP17.96■□□□□ 0.47
USP39-202ENST00000409025 ISLR2Q6UXK2 745 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 CEACAM20Q6UY09 585 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 PIWIL3Q7Z3Z3 882 aaKnown RBP17.96■□□□□ 0.47
USP39-202ENST00000409025 C6orf120Q7Z4R8 191 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 RDH12Q96NR8 316 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 AMDHD1Q96NU7 426 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 OSBPL10Q9BXB5 764 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 GLIPR2Q9H4G4 154 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 ZSCAN32Q9NX65 697 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 USE1Q9NZ43 259 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 IFT80Q9P2H3 777 aaPredicted RBP17.96■□□□□ 0.47
USP39-202ENST00000409025 PILRAQ9UKJ1 303 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 A0A0J9YY10 115 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 A0A1W2PR77 199 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 B4DGG1 531 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 H0YAE9 185 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 STK25O00506 426 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 PRKRAO75569 313 aaKnown RBP17.96■□□□□ 0.47
USP39-202ENST00000409025 IFNA14P01570 189 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 CSF2P04141 144 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 THRBP10828 461 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 GPC1P35052 558 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 CCT3P49368 545 aaKnown RBP17.96■□□□□ 0.47
USP39-202ENST00000409025 NCBP2P52298 156 aaKnown RBP eCLIP17.96■□□□□ 0.473e-6■■□□□ 12.2
USP39-202ENST00000409025 VLDLRP98155 873 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 IQCHQ86VS3 1027 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 OOSP2Q86WS3 158 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 CAMKVQ8NCB2 501 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 UTP15Q8TED0 518 aaKnown RBP17.96■□□□□ 0.47
USP39-202ENST00000409025 ZFYVE21Q9BQ24 234 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 KLHL25Q9H0H3 589 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 ENTPD4Q9Y227 616 aa17.96■□□□□ 0.47
USP39-202ENST00000409025 PGRMC2O15173 223 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 PROM1O43490 865 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 ERAL1O75616 437 aaKnown RBP17.95■□□□□ 0.46
USP39-202ENST00000409025 GNAO1P09471 354 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 RXRGP48443 463 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 ARHGDIAP52565 204 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 RACK1P63244 317 aaKnown RBP17.95■□□□□ 0.46
USP39-202ENST00000409025 KCNJ10P78508 379 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 RPL6Q02878 288 aaKnown RBP17.95■□□□□ 0.46
USP39-202ENST00000409025 SUZ12Q15022 739 aaKnown RBP17.95■□□□□ 0.46
USP39-202ENST00000409025 ELOCQ15369 112 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 ARMC6Q6NXE6 501 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 SLC48A1Q6P1K1 146 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 SHQ1Q6PI26 577 aaKnown RBP17.95■□□□□ 0.46
USP39-202ENST00000409025 TMEM179BQ7Z7N9 219 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 CAMKK1Q8N5S9 505 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 BAHD1Q8TBE0 780 aaPredicted RBP17.95■□□□□ 0.46
USP39-202ENST00000409025 LZICQ8WZA0 190 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 TBC1D17Q9HA65 648 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 SMURF2Q9HAU4 748 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 U3KQV3 271 aa17.95■□□□□ 0.46
USP39-202ENST00000409025 WASHC1A8K0Z3 465 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 MYO1GB0I1T2 1018 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 SMIM18P0DKX4 95 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 NME1P15531 152 aaKnown RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 ADARB1P78563 741 aaKnown RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 PPP2R2BQ00005 443 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 EPS8Q12929 822 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 PPP1R8Q12972 351 aaKnown RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 CRB2Q5IJ48 1285 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 C18orf63Q68DL7 685 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 ZNF761Q86XN6 746 aaPredicted RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 HS3ST5Q8IZT8 346 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 HORMAD2Q8N7B1 307 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 RERGQ96A58 199 aaPredicted RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 FBXL20Q96IG2 436 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 GUCD1Q96NT3 240 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 MAPKAP1Q9BPZ7 522 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 SEMA3GQ9NS98 782 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 GIMAP4Q9NUV9 329 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 EVA1BQ9NVM1 165 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 MYRFQ9Y2G1 1151 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 TDRD6O60522 2096 aaKnown RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 OR5K3A6NET4 321 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 C5orf58C9J3I9 102 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 M0QX08 132 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 TLR4O00206 839 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 VILLO15195 856 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 P2RX6O15547 441 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 H6PDO95479 791 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 OPN1SWP03999 348 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 PVRP15151 417 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 MAOBP27338 520 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 LSSP48449 732 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 RPS26P62854 115 aaKnown RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 TP53BP2Q13625 1128 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 ZIK1Q3SY52 487 aaPredicted RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 REEP3Q6NUK4 255 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 TNFAIP8L2Q6P589 184 aaPredicted RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 PATL1Q86TB9 770 aaKnown RBP17.94■□□□□ 0.46
USP39-202ENST00000409025 GKN2Q86XP6 184 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 AVL9Q8NBF6 648 aa17.94■□□□□ 0.46
USP39-202ENST00000409025 ZCCHC10Q8TBK6 192 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms