RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TSC22D4Q9Y3Q8 395 aa12.4□□□□□ -0.42
SDF4-203ENST00000403997 EXOC1LA0A1B0GW35 172 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 ASPDHA6ND91 283 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 PLPP1O14494 284 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 PRKNO60260 465 aaPredicted RBP12.39□□□□□ -0.43
SDF4-203ENST00000403997 NME2P1O60361 137 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 ZG16O60844 167 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 CLDN9O95484 217 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 SNRPAP09012 282 aaKnown RBP12.39□□□□□ -0.43
SDF4-203ENST00000403997 NME2P22392 152 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 TLX1P31314 330 aaPredicted RBP12.39□□□□□ -0.43
SDF4-203ENST00000403997 SSR4P51571 173 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 NEK2P51955 445 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 CCNG1P51959 295 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 CASP6P55212 293 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.39□□□□□ -0.433e-7■□□□□ 11.1
SDF4-203ENST00000403997 KRTCAP3Q53RY4 240 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 HSDL2Q6YN16 418 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 C16orf47Q6ZP98 133 aaPredicted RBP12.39□□□□□ -0.43
SDF4-203ENST00000403997 ZNF227Q86WZ6 799 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 OR4N5Q8IXE1 308 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 L3MBTL4Q8NA19 623 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 MORN4Q8NDC4 146 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 C7orf57Q8NEG2 295 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 OR14A16Q8NHC5 309 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 SREK1Q8WXA9 508 aaKnown RBP12.39□□□□□ -0.43
SDF4-203ENST00000403997 FRMD6Q96NE9 622 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 CDK15Q96Q40 435 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 MRPL57Q9BQC6 102 aaKnown RBP12.39□□□□□ -0.43
SDF4-203ENST00000403997 OR8D2Q9GZM6 311 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 RPF2Q9H7B2 306 aaKnown RBP12.39□□□□□ -0.43
SDF4-203ENST00000403997 XPR1Q9UBH6 696 aa12.39□□□□□ -0.43
SDF4-203ENST00000403997 KLF13Q9Y2Y9 288 aaPredicted RBP12.39□□□□□ -0.43
SDF4-203ENST00000403997 DOPEY1Q5JWR5 2465 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 C17orf105B2RV13 164 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 STX16-NPEPL1H3BU86 382 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 FOXE1O00358 373 aaPredicted RBP12.38□□□□□ -0.43
SDF4-203ENST00000403997 CCL21O00585 134 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 OR7A17O14581 309 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 STX16O14662 325 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 FGF17O60258 216 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 OR2J2O76002 312 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 RHOXF2BP0C7M4 288 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 COX7A2P14406 83 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 CUL3Q13618 768 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 TEX35Q5T0J7 233 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 C18orf63Q68DL7 685 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 TTC19Q6DKK2 380 aaPredicted RBP12.38□□□□□ -0.43
SDF4-203ENST00000403997 CYP20A1Q6UW02 462 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 TRMT10CQ7L0Y3 403 aaKnown RBP12.38□□□□□ -0.43
SDF4-203ENST00000403997 CYP4Z2PQ8N1L4 340 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 ZCCHC7Q8N3Z6 543 aaKnown RBP12.38□□□□□ -0.43
SDF4-203ENST00000403997 CPSF7Q8N684 471 aaKnown RBP12.38□□□□□ -0.43
SDF4-203ENST00000403997 OR52B6Q8NGF0 335 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 WDR20Q8TBZ3 569 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 SLC2A12Q8TD20 617 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 ASB15Q8WXK1 588 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 TANKQ92844 425 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 RBM18Q96H35 190 aaKnown RBP12.38□□□□□ -0.43
SDF4-203ENST00000403997 GPR137Q96N19 417 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 NSUN5Q96P11 429 aaKnown RBP12.38□□□□□ -0.43
SDF4-203ENST00000403997 DGAT2Q96PD7 388 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 PSD3Q9NYI0 1048 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 MYOTQ9UBF9 498 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 SUCOQ9UBS9 1254 aaKnown RBP12.38□□□□□ -0.43
SDF4-203ENST00000403997 PHF11Q9UIL8 331 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 SH3BGRL2Q9UJC5 107 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 ERVK-11Q9UQG0 969 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 ATG4BQ9Y4P1 393 aa12.38□□□□□ -0.43
SDF4-203ENST00000403997 UTP20O75691 2785 aaKnown RBP12.38□□□□□ -0.43
SDF4-203ENST00000403997 TMEM200CA6NKL6 621 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 A8MVJ9 347 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 KLRC4-KLRK1H3BQV0 150 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 WWP2O00308 870 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 PROM1O43490 865 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 ASNA1O43681 348 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 PEX1O43933 1283 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 SLC19A2O60779 497 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 EEDO75530 441 aaKnown RBP12.37□□□□□ -0.43
SDF4-203ENST00000403997 ETHE1O95571 254 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 ABHD2P08910 425 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 ZNF24P17028 368 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 BSGP35613 385 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 BUD31P41223 144 aaPredicted RBP12.37□□□□□ -0.43
SDF4-203ENST00000403997 CA7P43166 264 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 MEOX1P50221 254 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 ARFIP1P53367 373 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 HNRNPH2P55795 449 aaKnown RBP12.37□□□□□ -0.43
SDF4-203ENST00000403997 FOLH1Q04609 750 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 BIKQ13323 160 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 IL20RBQ6UXL0 311 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 MDGA2Q7Z553 956 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 MILR1Q7Z6M3 343 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 SULF2Q8IWU5 870 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 ZNF321PQ8N8H1 164 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 PPWD1Q96BP3 646 aaKnown RBP12.37□□□□□ -0.43
SDF4-203ENST00000403997 MAGED4Q96JG8 741 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 SERPINI1Q99574 410 aa12.37□□□□□ -0.43
SDF4-203ENST00000403997 NTMT1Q9BV86 223 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms