RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CCDC190Q86UF4 302 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 TRAPPC5Q8IUR0 188 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 ZNF366Q8N895 744 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 FAM46DQ8NEK8 389 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 TAPBPLQ9BX59 468 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 NLNQ9BYT8 704 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 CCDC177Q9NQR7 707 aaPredicted RBP24.36■■□□□ 1.49
COL13A1-203ENST00000398969 SNX8Q9Y5X2 465 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 PIPP12273 146 aaPredicted RBP24.36■■□□□ 1.49
COL13A1-203ENST00000398969 TP53BP2Q13625 1128 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 TEAD2Q15562 447 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 RPS26P11Q5JNZ5 115 aaPredicted RBP24.36■■□□□ 1.49
COL13A1-203ENST00000398969 SPANXN2Q5MJ10 180 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 VN1R5Q7Z5H4 357 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 SPRED2Q7Z698 418 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 PDXPQ96GD0 296 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 OR2AG1Q9H205 316 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 ICKQ9UPZ9 632 aa24.36■■□□□ 1.49
COL13A1-203ENST00000398969 MYO7AQ13402 2215 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 PNMA8CA0A1B0GUJ8 204 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 KMOO15229 486 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 SNX4O95219 450 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 BCL2A1Q16548 175 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 LEXMQ3ZCV2 418 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 CEACAM20Q6UY09 585 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 CLIP4Q8N3C7 705 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 DTD2Q96FN9 168 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 TDP1Q9NUW8 608 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 POU2F3Q9UKI9 436 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 LINC01553A4QN01 128 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 GPX5O75715 221 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 PTPN2P17706 415 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 RPS26P62854 115 aaKnown RBP24.35■■□□□ 1.49
COL13A1-203ENST00000398969 GDPD3Q7L5L3 318 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 LRIG1Q96JA1 1093 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 COQ10AQ96MF6 247 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 TRNT1Q96Q11 434 aaKnown RBP24.35■■□□□ 1.49
COL13A1-203ENST00000398969 NUAK2Q9H093 628 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 SLC25A19Q9HC21 320 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 C11orf16Q9NQ32 467 aa24.35■■□□□ 1.49
COL13A1-203ENST00000398969 LAMA3Q16787 3333 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 ENTPD6O75354 484 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 MOSPD3O75425 235 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 KRR1Q13601 381 aaKnown RBP24.34■■□□□ 1.49
COL13A1-203ENST00000398969 LRIT3Q3SXY7 679 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 CCBE1Q6UXH8 406 aaPredicted RBP24.34■■□□□ 1.49
COL13A1-203ENST00000398969 TRMT11Q7Z4G4 463 aaKnown RBP24.34■■□□□ 1.49
COL13A1-203ENST00000398969 C7orf61Q8IZ16 206 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 HCAR2Q8TDS4 363 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 UBE2E3Q969T4 207 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 OPALINQ96PE5 141 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 IL4I1Q96RQ9 567 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 FZD3Q9NPG1 666 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 EHD3Q9NZN3 535 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 REV1Q9UBZ9 1251 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 PDE4DIPQ5VU43 2346 aa24.34■■□□□ 1.49
COL13A1-203ENST00000398969 K7ESM1 405 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 TLR4O00206 839 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 ADAP00813 363 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 GSTT2P0CG29 244 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 GSTT2BP0CG30 244 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 WEE1P30291 646 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 ALDH9A1P49189 494 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 DEPDC1Q5TB30 811 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 TMIGD1Q6UXZ0 262 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 RTL10Q7L3V2 364 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 HORMAD2Q8N7B1 307 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 SLC38A5Q8WUX1 472 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 SDHCQ99643 169 aaPredicted RBP24.33■■□□□ 1.49
COL13A1-203ENST00000398969 KCNS3Q9BQ31 491 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 SPATA7Q9P0W8 599 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 PSMD11O00231 422 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 CTDSP2O14595 271 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 BCHEP06276 602 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 CAMK1Q14012 370 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 SLC9B2Q86UD5 537 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 TSC22D4Q9Y3Q8 395 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 WNT6Q9Y6F9 365 aa24.33■■□□□ 1.49
COL13A1-203ENST00000398969 C5orf58C9J3I9 102 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 LOC110117498-PIK3R3F6TDL0 507 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 ASNA1O43681 348 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 FGF19O95750 216 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 RHOP08100 348 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 OSMP13725 252 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 DDX6P26196 483 aaKnown RBP eCLIP24.32■■□□□ 1.48
COL13A1-203ENST00000398969 DEFA1P59665 94 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 DEFA3P59666 94 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 SNRPGP62308 76 aaKnown RBP24.32■■□□□ 1.48
COL13A1-203ENST00000398969 UBE3AQ05086 875 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 SAXO2Q658L1 398 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 TNFAIP8L2Q6P589 184 aaPredicted RBP24.32■■□□□ 1.48
COL13A1-203ENST00000398969 GPR32P1Q8NGA4 272 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 PIK3R3Q92569 461 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 NEURL3Q96EH8 262 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 RSPO3Q9BXY4 272 aaPredicted RBP24.32■■□□□ 1.48
COL13A1-203ENST00000398969 UCK2Q9BZX2 261 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 ZCCHC2Q9C0B9 1178 aaKnown RBP24.32■■□□□ 1.48
COL13A1-203ENST00000398969 HHATLQ9HCP6 504 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 A4GALTQ9NPC4 353 aa24.32■■□□□ 1.48
COL13A1-203ENST00000398969 SLAMF7Q9NQ25 335 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms