RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ZNF536O15090 1300 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 SLC16A5O15375 505 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 MAFO75444 373 aaPredicted RBP11.88□□□□□ -0.51
SMU1-201ENST00000397149 CD48P09326 243 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 CHRM1P11229 460 aaPredicted RBP11.88□□□□□ -0.51
SMU1-201ENST00000397149 PTH2RP49190 550 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 SNRPD2P62316 118 aaKnown RBP11.88□□□□□ -0.51
SMU1-201ENST00000397149 LCN10Q6JVE6 187 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 CCDC116Q8IYX3 515 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 MAPK15Q8TD08 544 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 MITD1Q8WV92 249 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 PCDHGA5Q9Y5G8 931 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.88□□□□□ -0.51
SMU1-201ENST00000397149 CDK12Q9NYV4 1490 aaPredicted RBP11.88□□□□□ -0.51
SMU1-201ENST00000397149 H6PDO95479 791 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 CHRNB1P11230 501 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 PTGER3P43115 390 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 OR5H2Q8NGV7 314 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 P2RY13Q9BPV8 354 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 SGIP1Q9BQI5 828 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 MRI1Q9BV20 369 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 RIOX1Q9H6W3 641 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 ZBTB26Q9HCK0 441 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 SLC17A6Q9P2U8 582 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 ACAD8Q9UKU7 415 aa11.88□□□□□ -0.51
SMU1-201ENST00000397149 BHLHE40O14503 412 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SIX3O95343 332 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 CD72P21854 359 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 CRHBPP24387 322 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 RBMS1P29558 406 aaKnown RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 RHBDL3P58872 404 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 ARHGAP19Q14CB8 494 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 MEP1AQ16819 746 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 LANCL3Q6ZV70 420 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 RNF130Q86XS8 419 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 NDNFQ8TB73 568 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 ROPN1LQ96C74 230 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 CPXM1Q96SM3 734 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 MAP3K3Q99759 626 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 ERVK-6Q9BXR3 956 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 FN3KRPQ9HA64 309 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 PRTFDC1Q9NRG1 225 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SPATA6Q9NWH7 488 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 BAZ2BQ9UIF8 2168 aaKnown RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 OR6C65A6NJZ3 312 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 ALOX15BO15296 676 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 AP2A1O95782 977 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 H2AFB2P0C5Z0 115 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 HOXB2P14652 356 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 NDUFV2P19404 249 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 BMP6P22004 513 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 CD34P28906 385 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 TMEM119Q4V9L6 283 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 C3orf38Q5JPI3 329 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 BORAQ6PGQ7 559 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 ZFPM1Q8IX07 1006 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SLC2A12Q8TD20 617 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SHDQ96IW2 340 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 HS6ST2Q96MM7 605 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 CD93Q9NPY3 652 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 TEX10Q9NXF1 929 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 UGGT1Q9NYU2 1555 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 F8A1P23610 371 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 CSNK2A1P68400 391 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 DAG1Q14118 895 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 TXNDC8Q6A555 127 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 UNQ6126/PRO20091Q6UXV3 157 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SLC24A5Q71RS6 500 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 TPRA1Q86W33 373 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 THOC6Q86W42 341 aaKnown RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 CSNK2A3Q8NEV1 391 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 OR51T1Q8NGJ9 327 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 GHRLQ9UBU3 117 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 RAB27BO00194 218 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SPDEFO95238 335 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 CLCN2P51788 898 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SFRP5Q5T4F7 317 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 LRRC38Q5VT99 294 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 TIGD3Q6B0B8 471 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 VSTM1Q6UX27 236 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 PTF1AQ7RTS3 328 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 PHF13Q86YI8 300 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 DCUN1D4Q92564 292 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 OSTF1Q92882 214 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SCLYQ96I15 445 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SARDHQ9UL12 918 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 SEC14L6B5MCN3 397 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 FTCDNL1E5RQL4 147 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 TP53I11O14683 189 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 TCAPO15273 167 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 NUDT21O43809 227 aaKnown RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 ADH5P11766 374 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 XRCC1P18887 633 aaPredicted RBP11.87□□□□□ -0.51
SMU1-201ENST00000397149 GDF5P43026 501 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 ERVK-25P63136 954 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 HEPHL1Q6MZM0 1159 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 FAM71AQ8IYT1 594 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 OR51Q1Q8NH59 317 aa11.87□□□□□ -0.51
SMU1-201ENST00000397149 C9orf43Q8TAL5 461 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms