RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 RABEP2Q9H5N1 569 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 ACTR8Q9H981 624 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 NPHS2Q9NP85 383 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 PFDN4Q9NQP4 134 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 GPRC5BQ9NZH0 403 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 VTI1BQ9UEU0 232 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 MARCOQ9UEW3 520 aaPredicted RBP9.71□□□□□ -0.86
NEDD8-202ENST00000396828 HAO1Q9UJM8 370 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 DYRK1BQ9Y463 629 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 ASB1Q9Y576 335 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 KCNE2Q9Y6J6 123 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 HIVEP1P15822 2718 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 ZFHX3Q15911 3703 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 PKDREJQ9NTG1 2253 aa9.71□□□□□ -0.86
NEDD8-202ENST00000396828 ZNF860A6NHJ4 632 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 TRPC5OSA6NMA1 111 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 H0YIG0 161 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 CCL21O00585 134 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 UBFD1O14562 309 aaKnown RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 OR7A17O14581 309 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 CCNDBP1O95273 360 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 NSA2O95478 260 aaKnown RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 CLDN9O95484 217 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ENO1P06733 434 aaKnown RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 SNRPB2P08579 225 aaKnown RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 FGF4P08620 206 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 GNAZP19086 355 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ARRB2P32121 409 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 BCL6P41182 706 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 CA7P43166 264 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 XCR1P46094 333 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 AVPR1BP47901 424 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ABATP80404 500 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ADORA2A-AS1P86434 159 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 MEF2AQ02078 507 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 TUBA3CQ13748 450 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 NAA25Q14CX7 972 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 INAQ16352 499 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 BTBD16Q32M84 506 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 MFSD4BQ5TF39 518 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ZNF468Q5VIY5 522 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ABHD17BQ5VST6 288 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 SPINK14Q6IE38 97 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 H3F3CQ6NXT2 135 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 TUBA3EQ6PEY2 450 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 NCCRP1Q6ZVX7 275 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 SPATA21Q7Z572 469 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 CPEB2Q7Z5Q1 589 aaKnown RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 MILR1Q7Z6M3 343 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 MRGPRGQ86SM5 289 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 CLYBLQ8N0X4 340 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 OR5T3Q8NGG3 340 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ZNF473Q8WTR7 871 aaKnown RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 TSLPQ969D9 159 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ELAC2Q9BQ52 826 aaKnown RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 NTMT1Q9BV86 223 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 SGPP1Q9BX95 441 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 RNF32Q9H0A6 362 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 TSPAN10Q9H1Z9 355 aaPredicted RBP9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ZBTB26Q9HCK0 441 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 TMEM184CQ9NVA4 438 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 PNPOQ9NVS9 261 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ABI3Q9P2A4 366 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 KLHL14Q9P2G3 628 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 SEC14L3Q9UDX4 400 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 ZDHHC2Q9UIJ5 367 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 FIS1Q9Y3D6 152 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 TRAF6Q9Y4K3 522 aa9.7□□□□□ -0.86
NEDD8-202ENST00000396828 KCNE1BA0A087WTH5 132 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 C19orf84I3L1E1 186 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 PPP6CO00743 305 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 TXNDC9O14530 226 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 AZIN1O14977 448 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 HDAC3O15379 428 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 RRP9O43818 475 aaKnown RBP9.69□□□□□ -0.86
NEDD8-202ENST00000396828 UGDHO60701 494 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 RDH16O75452 317 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 CDC123O75794 336 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-202ENST00000396828 OR4F21O95013 312 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 UROSP10746 265 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 CD96P40200 585 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 OLR1P78380 273 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 RHAGQ02094 409 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 IRF8Q02556 426 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 ART3Q13508 389 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 NCOA6Q14686 2063 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-202ENST00000396828 TERF2Q15554 542 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 C3AR1Q16581 482 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 XKR6Q5GH73 641 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 ZNF766Q5HY98 468 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 ACER2Q5QJU3 275 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 LIPJQ5W064 366 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 KANK2Q63ZY3 851 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 PLAG1Q6DJT9 500 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 LCTLQ6UWM7 567 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 PIGWQ7Z7B1 504 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 MYLK4Q86YV6 388 aaPredicted RBP9.69□□□□□ -0.86
NEDD8-202ENST00000396828 ANKS4BQ8N8V4 417 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 MDS2Q8NDY4 140 aa9.69□□□□□ -0.86
NEDD8-202ENST00000396828 OR4F6Q8NGB9 312 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms