RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 QRFPRQ96P65 431 aa7.75□□□□□ -1.17
SCFD1-202ENST00000396629 TIMP4Q99727 224 aa7.75□□□□□ -1.17
SCFD1-202ENST00000396629 AIF1LQ9BQI0 150 aa7.75□□□□□ -1.17
SCFD1-202ENST00000396629 TSGA10Q9BZW7 698 aa7.75□□□□□ -1.17
SCFD1-202ENST00000396629 MRPS33Q9Y291 106 aaKnown RBP7.75□□□□□ -1.17
SCFD1-202ENST00000396629 DSCAMO60469 2012 aa7.75□□□□□ -1.17
SCFD1-202ENST00000396629 HEATR5AQ86XA9 2040 aa7.75□□□□□ -1.17
SCFD1-202ENST00000396629 TCRBV7S3A2A0A539 114 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 SH3D21A4FU49 640 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 RNF212BA8MTL3 300 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 CYR61O00622 381 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 NRDCO43847 1150 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 CTNSO60931 367 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 FTCDO95954 541 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 IFNA16P05015 189 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 HIST1H2AGP0C0S8 130 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 HIST1H2ADP20671 130 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 RGS4P49798 205 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 STXBP1P61764 594 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 DUSP8Q13202 625 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 THOC5Q13769 683 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 NXPE4Q6UWF7 544 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 CLNKQ7Z7G1 428 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 PM20D2Q8IYS1 436 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 SLC15A4Q8N697 577 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 SLC2A12Q8TD20 617 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 FAR2Q96K12 515 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 HIST1H2AHQ96KK5 128 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 HIST1H2AJQ99878 128 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 H2AFJQ9BTM1 129 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 ALOXE3Q9BYJ1 711 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 OR8D2Q9GZM6 311 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 TRMT6Q9UJA5 497 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 ZCWPW2A0A1B0GU75 182 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 EEF1E1-BLOC1S5C9J1V9 151 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 EEF1E1O43324 174 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 HAUS5O94927 633 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 C1QAP02745 245 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 SLC1A2P43004 574 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 AGFG1P52594 562 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 AP1S2P56377 157 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 CBLBQ13191 982 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 DHX34Q14147 1143 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 RBBP5Q15291 538 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 SEL1L2Q5TEA6 688 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 DRICH1Q6PGQ1 229 aaPredicted RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 LMNTD2Q8IXW0 634 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 MYO1HQ8N1T3 1032 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 FAM47BQ8NA70 645 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 PPP1R14CQ8TAE6 165 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 NUBPLQ8TB37 319 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 ZNF721Q8TF20 911 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 ATL1Q8WXF7 558 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 MS4A6EQ96DS6 147 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 RBM24Q9BX46 236 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 CALHM2Q9HA72 323 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 ARL15Q9NXU5 204 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 CNIH4Q9P003 139 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 FBXO5Q9UKT4 447 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 CNOT11Q9UKZ1 510 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 EIF3LQ9Y262 564 aaKnown RBP7.74□□□□□ -1.17
SCFD1-202ENST00000396629 NPFFR2Q9Y5X5 522 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 IKBKGQ9Y6K9 419 aa7.74□□□□□ -1.17
SCFD1-202ENST00000396629 C15orf38-AP3S2A0A0A6YYH1 394 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 A0A0G2JN53 185 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 MYOCOSA0A1B0GUC4 107 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 MAGEB16A2A368 324 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 C17orf105B2RV13 164 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 CASKO14936 926 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 B3GALT2O43825 422 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 FPR1P21462 350 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 HNRNPH1P31943 449 aaKnown RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 LIM2P55344 173 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 KCNJ2P63252 427 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 KRTAP1-1Q07627 177 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 ASPHQ12797 758 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 ACKR1Q16570 336 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 CCNG2Q16589 344 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 NHSL2Q5HYW2 709 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 VASNQ6EMK4 673 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 PAQR3Q6TCH7 311 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 SYDE1Q6ZW31 735 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 CAND1Q86VP6 1230 aaKnown RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 DND1Q8IYX4 353 aaKnown RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 SLC22A8Q8TCC7 542 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 ZNF669Q96BR6 464 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 SPACA9Q96E40 222 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 TSNARE1Q96NA8 513 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 SECISBP2Q96T21 854 aaKnown RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 CSF3RQ99062 836 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 GALNT8Q9NY28 637 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 DYRK1BQ9Y463 629 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 TESMINQ9Y4I5 508 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 CHCHD2Q9Y6H1 151 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 MED12LQ86YW9 2145 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 LRIT2A6NDA9 550 aa7.73□□□□□ -1.17
SCFD1-202ENST00000396629 ERI3O43414 337 aaKnown RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 TRIM3O75382 744 aaPredicted RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 ERN1O75460 977 aaKnown RBP7.73□□□□□ -1.17
SCFD1-202ENST00000396629 ETHE1O95571 254 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms