RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 LRTM1Q9HBL6 345 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 PFDN4Q9NQP4 134 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 PNPOQ9NVS9 261 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 C1orf109Q9NX04 203 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 TEX10Q9NXF1 929 aaPredicted RBP18.03■□□□□ 0.48
HOXA9-202ENST00000396345 LHX6Q9UPM6 363 aa18.03■□□□□ 0.48
HOXA9-202ENST00000396345 IGKV3D-11A0A0A0MRZ8 115 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 IGHV1-45A0A0A0MS14 117 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 IGHV3-20A0A0C4DH32 117 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 A0A1W2PQ72 361 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 NPIPB8E9PQR5 432 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 PRKRAO75569 313 aaKnown RBP18.02■□□□□ 0.48
HOXA9-202ENST00000396345 MYO1DO94832 1006 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 AIFM1O95831 613 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 HPP00738 406 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 OR4D2P58180 307 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 ACTN3Q08043 901 aaPredicted RBP18.02■□□□□ 0.48
HOXA9-202ENST00000396345 CHAF1BQ13112 559 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 SFT2D3Q587I9 215 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 DCAF10Q5QP82 559 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 APLFQ8IW19 511 aaPredicted RBP18.02■□□□□ 0.48
HOXA9-202ENST00000396345 FAM76AQ8TAV0 307 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 LRRC8CQ8TDW0 803 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 TM4SF18Q96CE8 201 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 EBPLQ9BY08 206 aa18.02■□□□□ 0.48
HOXA9-202ENST00000396345 NSG1A0A0A6YYJ2 146 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 TCRBV16S1A1N1A0A5B0 115 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 GLOD5A6NK44 160 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 MASP2O00187 686 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 LDB3O75112 727 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 ANXA4P09525 319 aaPredicted RBP18.01■□□□□ 0.47
HOXA9-202ENST00000396345 OCRLQ01968 901 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 STX4Q12846 297 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 PCOLCEQ15113 449 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 PDCD2Q16342 344 aaPredicted RBP18.01■□□□□ 0.47
HOXA9-202ENST00000396345 GALNTL6Q49A17 601 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 XKR7Q5GH72 579 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 NDUFAF5Q5TEU4 345 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 NOXRED1Q6NXP6 359 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 CLEC1AQ8NC01 280 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 C19orf60Q96EN9 201 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 PPP3R2Q96LZ3 170 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 C3orf30Q96M34 536 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 ZNF160Q9HCG1 818 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 ATP13A2Q9NQ11 1180 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 RIC8BQ9NVN3 520 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 POLR3HQ9Y535 204 aaPredicted RBP18.01■□□□□ 0.47
HOXA9-202ENST00000396345 CLDN16Q9Y5I7 305 aa18.01■□□□□ 0.47
HOXA9-202ENST00000396345 MED13Q9UHV7 2174 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 CACNA1GO43497 2377 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 TGFBR3LH3BV60 316 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 LSM1O15116 133 aaKnown RBP18■□□□□ 0.47
HOXA9-202ENST00000396345 SEC24DO94855 1032 aaPredicted RBP18■□□□□ 0.47
HOXA9-202ENST00000396345 PPP2R1BP30154 601 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 CCL11P51671 97 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 TAS2R50P59544 299 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 ID2Q02363 134 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 AIMP2Q13155 320 aaKnown RBP18■□□□□ 0.47
HOXA9-202ENST00000396345 KIAA0040Q15053 153 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 OR52E8Q6IFG1 317 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 OR4N5Q8IXE1 308 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 C16orf78Q8WTQ4 265 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 TTC9Q92623 222 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 UCN3Q969E3 161 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 ANKRD9Q96BM1 317 aaPredicted RBP18■□□□□ 0.47
HOXA9-202ENST00000396345 ARHGAP9Q9BRR9 750 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 TUBB6Q9BUF5 446 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 FAIM2Q9BWQ8 316 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 ALOXE3Q9BYJ1 711 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 TRIM55Q9BYV6 548 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 DLGAP4Q9Y2H0 992 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 PCDHA9Q9Y5H5 950 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 NBEAQ8NFP9 2946 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 LOC400499M0QZD8 3231 aa18■□□□□ 0.47
HOXA9-202ENST00000396345 MYOCOSA0A1B0GUC4 107 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 ATP6AP2A0A1C7CYW4 349 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 C1orf226A1L170 272 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 SYNDIG1LA6NDD5 238 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 WASHC1A8K0Z3 465 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 A8MUA0 341 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 PGRMC2O15173 223 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 FGF17O60258 216 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 ATP6AP2O75787 350 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 DNAJB5O75953 348 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 JUNP05412 331 aaKnown RBP17.99■□□□□ 0.47
HOXA9-202ENST00000396345 KITP10721 976 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 GSTM5P46439 218 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 RPL38P63173 70 aaKnown RBP17.99■□□□□ 0.47
HOXA9-202ENST00000396345 FOLH1Q04609 750 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 SERTAD2Q14140 314 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 LINC00303Q3SY05 128 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 PAPD4Q6PIY7 484 aaKnown RBP17.99■□□□□ 0.47
HOXA9-202ENST00000396345 PARP9Q8IXQ6 854 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 ARFGAP2Q8N6H7 521 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 C7orf57Q8NEG2 295 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 CKAP2Q8WWK9 683 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 TUBGCP3Q96CW5 907 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 PPP1R36Q96LQ0 422 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 IMMP1LQ96LU5 166 aa17.99■□□□□ 0.47
HOXA9-202ENST00000396345 MAGEB18Q96M61 343 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms