RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ELOAQ14241 798 aaKnown RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 NFATC4Q14934 902 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 IQCCQ4KMZ1 466 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 TSPAN33Q86UF1 283 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF565Q8N9K5 539 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 FAM83FQ8NEG4 500 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 GPR150Q8NGU9 434 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 OR52N1Q8NH53 320 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 DCLRE1CQ96SD1 692 aaKnown RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 TTYH2Q9BSA4 534 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF416Q9BWM5 594 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 SLC17A9Q9BYT1 436 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 FAM117AQ9C073 453 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 TNKS2Q9H2K2 1166 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 CHRAC1Q9NRG0 131 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 DDX28Q9NUL7 540 aaKnown RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 COPS3Q9UNS2 423 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 MPTX1A8MV57 137 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ARHGEF9O43307 516 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 CYBBP04839 570 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ADORA3P0DMS8 318 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ACADLP28330 430 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 CCKBRP32239 447 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 VIPR1P32241 457 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 TGFBR2P37173 567 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ID4P47928 161 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 SEMA3AQ14563 771 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF404Q494X3 552 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 GPR139Q6DWJ6 353 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 BEND4Q6ZU67 534 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 AMIGO1Q86WK6 493 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 RYBPQ8N488 228 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 PARP16Q8N5Y8 322 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 PSMA8Q8TAA3 256 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 HMGB4Q8WW32 186 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 DACT3Q96B18 629 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 RCN3Q96D15 328 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 AURKBQ96GD4 344 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 PDLIM5Q96HC4 596 aaKnown RBP6.55□□□□□ -1.36
CSDE1-204ENST00000369530 EXOC2Q96KP1 924 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 EHD3Q9NZN3 535 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 FIS1Q9Y3D6 152 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 HRH3Q9Y5N1 445 aa6.55□□□□□ -1.36
CSDE1-204ENST00000369530 MEIOCA2RUB1 952 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 TMEM202A6NGA9 273 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 E7ENX8 843 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 LMO7DNF2Z398 122 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 FLRT2O43155 660 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 GLRA3O75311 464 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 PIRTP0C851 137 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 HSD17B1P14061 328 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 ZNF250P15622 560 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CD38P28907 300 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 GLRBP48167 497 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SPINT3P49223 89 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 DGKQP52824 942 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 IL18R1Q13478 541 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 MICAQ29983 383 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 PDSS1Q5T2R2 415 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 MARC1Q5VT66 337 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CMC1Q7Z7K0 106 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 ADCK1Q86TW2 530 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 RAB43Q86YS6 212 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 C9orf62Q8N4C0 152 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 GPR26Q8NDV2 337 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 OR4D10Q8NGI6 311 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 OR6S1Q8NH40 331 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 OR8D1Q8WZ84 308 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 LIN37Q96GY3 246 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 ZC3HAV1LQ96H79 300 aaKnown RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 UCK2Q9BZX2 261 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SEMA6AQ9H2E6 1030 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 HEXA-AS1Q9H8Q6 139 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 TMEM9BQ9NQ34 198 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 KLK13Q9UKR3 277 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 RAB23Q9ULC3 237 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 NDUFAF1Q9Y375 327 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 PCDHGB6Q9Y5F9 930 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SNX13Q9Y5W8 968 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CRYBG3Q68DQ2 2970 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 HEATR9A2RTY3 570 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SSX5O60225 188 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 ANXA9O76027 345 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 PGAM1P18669 254 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 TPSB2P20231 275 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CHRNA4P43681 627 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 RPL6Q02878 288 aaKnown RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 EPS8Q12929 822 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 USP10Q14694 798 aaKnown RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 TPSAB1Q15661 275 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SAMD4BQ5PRF9 694 aaKnown RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 ZDHHC13Q8IUH4 622 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SFTPA2Q8IWL1 248 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SLC22A15Q8IZD6 547 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 RNF113BQ8IZP6 322 aaKnown RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 CHDHQ8NE62 594 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-204ENST00000369530 OR2I1PQ8NGU4 316 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 SLC13A3Q8WWT9 602 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 ST8SIA4Q92187 359 aa6.54□□□□□ -1.36
CSDE1-204ENST00000369530 KIAA1191Q96A73 305 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms