RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 NATD1Q8N6N6 113 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 ZNF655Q8N720 491 aaPredicted RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 RNF148Q8N7C7 305 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 RERGQ96A58 199 aaPredicted RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 PPCDCQ96CD2 204 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 PPM1MQ96MI6 270 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 CCDC115Q96NT0 180 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 FCRL4Q96PJ5 515 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 TEFMQ96QE5 360 aaKnown RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 CHRNA10Q9GZZ6 450 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 PAIP1Q9H074 479 aaKnown RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 PRDM7Q9NQW5 492 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 LRIT1Q9P2V4 623 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 PACSIN3Q9UKS6 424 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 PCDHB14Q9Y5E9 798 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 RNF215Q9Y6U7 377 aa11.45□□□□□ -0.58
USF1-203ENST00000368021 NUP214P35658 2090 aaPredicted RBP11.45□□□□□ -0.58
USF1-203ENST00000368021 TMPRSS11DO60235 418 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 PCDHGA12O60330 932 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 GUCY1B2O75343 617 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 PVRP15151 417 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 CDH3P22223 829 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ATP5A1P25705 553 aaKnown RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 BNIP2Q12982 314 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 FLOT2Q14254 428 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 SLC9A5Q14940 896 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 RUNDC3AQ59EK9 446 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 RABL3Q5HYI8 236 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ZCCHC8Q6NZY4 707 aaKnown RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 DGLUCYQ7Z3D6 616 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ERI1Q8IV48 349 aaKnown RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 MSRB3Q8IXL7 192 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 CARFQ8N187 725 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 EID2Q8N6I1 236 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 C19orf47Q8N9M1 422 aaKnown RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 CD180Q99467 661 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ROGDIQ9GZN7 287 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 MUC13Q9H3R2 512 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ALG2Q9H553 416 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 MIEF1Q9NQG6 463 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 SLC25A37Q9NYZ2 338 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 SH3BP4Q9P0V3 963 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 CELSR3Q9NYQ7 3312 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 SPAARA0A1B0GVQ0 90 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 TLCD2A6NGC4 264 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 C4orf51C9J302 202 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 H3BNX3 289 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 PEX1O43933 1283 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 KCNK5O95279 499 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ZNF883P0CG24 379 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ZCCHC18P0CG32 403 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 SMIM10L1P0DMW3 83 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ALPPL2P10696 532 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 DRD2P14416 443 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ST6GAL1P15907 406 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 TCN1P20061 433 aaPredicted RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 GPLD1P80108 840 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 MS4A2Q01362 244 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 FXNQ16595 210 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 CCDC157Q569K6 752 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ZC3H12BQ5HYM0 836 aaKnown RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 MRM1Q6IN84 353 aaKnown RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 ANKRD26P1Q6NSI1 321 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ANKRD46Q86W74 232 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 PTRH1Q86Y79 214 aaKnown RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 ACOT4Q8N9L9 421 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 KCT2Q8NC54 265 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 FAM156AQ8NDB6 213 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 OR6C4Q8NGE1 309 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 GOT1L1Q8NHS2 421 aaPredicted RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 EME1Q96AY2 570 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 ZDHHC12Q96GR4 267 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 TCTN2Q96GX1 697 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 SMIM10Q96HG1 83 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 PHF12Q96QT6 1004 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 PANX1Q96RD7 426 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 MACROD1Q9BQ69 325 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 OSBPL10Q9BXB5 764 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 CLK4Q9HAZ1 481 aaKnown RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 TAS2R7Q9NYW3 318 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 EHD3Q9NZN3 535 aa11.44□□□□□ -0.58
USF1-203ENST00000368021 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.44□□□□□ -0.58
USF1-203ENST00000368021 FRYQ5TBA9 3013 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 ASXL3Q9C0F0 2248 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 IGHV1OR21-1A0A087WYE8 117 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 LOC105369274A0A096LPK9 316 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 LOC102723532A0A0G2JNH3 316 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 H0YGG7 62 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 P2RX6O15547 441 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 FLRT2O43155 660 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 CCDC159P0C7I6 412 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 FAM58BPP0C7Q3 252 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 CDK4P11802 303 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 PNLIPP16233 465 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 ZNF10P21506 573 aaPredicted RBP11.43□□□□□ -0.58
USF1-203ENST00000368021 GRK6P43250 576 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 HSPA13P48723 471 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 ARF3P61204 181 aaPredicted RBP11.43□□□□□ -0.58
USF1-203ENST00000368021 PLIN5Q00G26 463 aa11.43□□□□□ -0.58
USF1-203ENST00000368021 MC1RQ01726 317 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms