RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 LIMK1P53667 647 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 MANFP55145 182 aaKnown RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SH3BGRP55822 239 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ACTR1AP61163 376 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 APOFQ13790 326 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ZNF630Q2M218 657 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 OR2T5Q6IEZ7 315 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 AMIGO1Q86WK6 493 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TMEM145Q8NBT3 493 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 CADM4Q8NFZ8 388 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 OR2T29Q8NH02 315 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ZFP28Q8NHY6 868 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TM4SF18Q96CE8 201 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ZBED6CLQ96FA7 236 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TPD52L3Q96J77 140 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TSC22D3Q99576 134 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 DPH7Q9BTV6 452 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 YTHDF1Q9BYJ9 559 aaKnown RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ING2Q9H160 280 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 MIR1-1HGQ9H1L0 117 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 DDX31Q9H8H2 851 aaKnown RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TMEM9BQ9NQ34 198 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TRNAU1APQ9NX07 287 aaKnown RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TUBA8Q9NY65 449 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 PCOLCE2Q9UKZ9 415 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SLC6A14Q9UN76 642 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ANGPT4Q9Y264 503 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 A0A087WXM4 84 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 METTL12A8MUP2 240 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SEC24DO94855 1032 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 RASGRP1O95267 797 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 CDH2P19022 906 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TSFMP43897 325 aaKnown RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 RABIFP47224 123 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SRP54P61011 504 aaKnown RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ADARB1P78563 741 aaKnown RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ILF3Q12906 894 aaKnown RBP eCLIP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SCARB2Q14108 478 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 PLCL1Q15111 1095 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SPDYE7PQ495Y7 208 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SHQ1Q6PI26 577 aaKnown RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SLC23A3Q6PIS1 610 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TBPL2Q6SJ96 375 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ISLR2Q6UXK2 745 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TRIM48Q8IWZ4 208 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 NAGSQ8N159 534 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ARL10Q8N8L6 244 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TSACCQ96A04 125 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 FBXL20Q96IG2 436 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 BMFQ96LC9 184 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 KCNC2Q96PR1 638 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 NRTNQ99748 197 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ZNF717Q9BY31 904 aaPredicted RBP10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SRMSQ9H3Y6 488 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 REEP1Q9H902 201 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 TBC1D29Q9UFV1 150 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SUSD2Q9UGT4 822 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 ERVK-11Q9UQG0 969 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 SNX8Q9Y5X2 465 aa10.34□□□□□ -0.75
H3F3A-202ENST00000366814 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 LRIT2A6NDA9 550 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 TMEM247A6NEH6 219 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 MYO1GB0I1T2 1018 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 PRAMEF26H0Y7S4 382 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 PLOD2O00469 737 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 SCAMP1O15126 338 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 PRICKLE3O43900 615 aaPredicted RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 HS6ST1O60243 411 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 LCMT2O60294 686 aaKnown RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 KLHL18O94889 574 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 TBX6O95947 436 aaPredicted RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 CHRM5P08912 532 aaPredicted RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 GNAO1P09471 354 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 F3P13726 295 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 ETFAP13804 333 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 DNAJA1P31689 397 aaKnown RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 NUDT1P36639 197 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 DCTP40126 519 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 PLA2G16P53816 162 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 STXBP1P61764 594 aaKnown RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 PPP2R2BQ00005 443 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 FOXK2Q01167 660 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 SLC9A5Q14940 896 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 PEAR1Q5VY43 1037 aaPredicted RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 SLC30A9Q6PML9 568 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 PIWIL3Q7Z3Z3 882 aaKnown RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 SATL1Q86VE3 508 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 RNF130Q86XS8 419 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 PLD3Q8IV08 490 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 C8orf59Q8N0T1 100 aaPredicted RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 CREB3L4Q8TEY5 395 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 NRBF2Q96F24 287 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 C17orf62Q9BQA9 187 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 DOHHQ9BU89 302 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 SARGQ9BW04 601 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 GTPBP2Q9BX10 602 aaKnown RBP10.33□□□□□ -0.76
H3F3A-202ENST00000366814 GRIP2Q9C0E4 1043 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 GABARAPL1Q9H0R8 117 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 EHD3Q9NZN3 535 aa10.33□□□□□ -0.76
H3F3A-202ENST00000366814 SCHIP1Q9P0W5 487 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms