RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TBPL1P62380 186 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CBLBQ13191 982 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 MICAQ29983 383 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF791Q3KP31 576 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-201ENST00000361866 FAM46CQ5VWP2 391 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 AMZ2Q86W34 360 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 LYSMD2Q8IV50 215 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CCDC28AQ8IWP9 274 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ATP6V1C2Q8NEY4 427 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 TNFAIP8L1Q8WVP5 186 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 EFHD2Q96C19 240 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-201ENST00000361866 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 SORBS1Q9BX66 1292 aaKnown RBP13.31□□□□□ -0.28
COL6A1-201ENST00000361866 NTN4Q9HB63 628 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 GABRQQ9UN88 632 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 MGAT4BQ9UQ53 548 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 GFRA2O00451 464 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 AOC2O75106 756 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 EPHX1P07099 455 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CAPZA2P47755 286 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CXCR4P61073 352 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 PPP2R2DQ66LE6 453 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 IKBIPQ70UQ0 350 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 NUDT13Q86X67 352 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CCDC116Q8IYX3 515 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 MSANTD3Q96H12 275 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 C12orf66Q96MD2 445 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 MBOAT4Q96T53 435 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 RANGRFQ9HD47 186 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ZDHHC4Q9NPG8 344 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ELOVL2Q9NXB9 296 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 RDH8Q9NYR8 311 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 SLC25A37Q9NYZ2 338 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ADORA3P0DMS8 318 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ITGAMP11215 1152 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 NT5EP21589 574 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CD70P32970 193 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CLCNKAP51800 687 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 BIKQ13323 160 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ADAM15Q13444 863 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 XKR7Q5GH72 579 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 TMEM19Q96HH6 336 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 BCL7BQ9BQE9 202 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 SLC7A5P2Q9GIP4 190 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 LMAN2LQ9H0V9 348 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ENPP4Q9Y6X5 453 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 DRGXA6NNA5 263 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 RIIAD1A6NNX1 92 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 SMAD9O15198 467 aaKnown RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 EEF1E1O43324 174 aaKnown RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 MMP20O60882 483 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 LEFTY1O75610 366 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 RAB36O95755 333 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 ACP5P13686 325 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 MAT2AP31153 395 aaKnown RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 CLCN7P51798 805 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 HNRNPFP52597 415 aaKnown RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 SLC35A2P78381 396 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 ARF5P84085 180 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 RPA4Q13156 261 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 NKG7Q16617 165 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 CLLU1OSQ5K130 101 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 CBLL1Q75N03 491 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 SERPINA11Q86U17 422 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 FAM124AQ86V42 546 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 OR4C6Q8NH72 309 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 C2orf15Q8WU43 125 aaKnown RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 KCNN1Q92952 543 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 NTMT1Q9BV86 223 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 PAK6Q9NQU5 681 aaPredicted RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 RABL2BQ9UNT1 228 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 STRCQ7RTU9 1775 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 GRXCR2A6NFK2 248 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 ANHXE9PGG2 379 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 M0R3H8 397 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 OR6A2O95222 327 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 HLA-EP13747 358 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 RHCEP18577 417 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 OMPP47874 163 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 SLC9A5Q14940 896 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 FRMPD2BQ6IN97 320 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 OTOP2Q7RTS6 562 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 C6orf120Q7Z4R8 191 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 ENTHD1Q8IYW4 607 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 CHST14Q8NCH0 376 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 DUS3LQ96G46 650 aaKnown RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 SLC12A9Q9BXP2 914 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 BRD7Q9NPI1 651 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 TLR9Q9NR96 1032 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 WNT6Q9Y6F9 365 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 FRS3O43559 492 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 SULT1C4O75897 302 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 ALPPP05187 535 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 STARP49675 285 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 PNLIPRP1P54315 467 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 HSF2Q03933 536 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 PLAG1Q6DJT9 500 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 BCDIN3DQ7Z5W3 292 aaKnown RBP13.3□□□□□ -0.28
COL6A1-201ENST00000361866 OR4K5Q8NGD3 323 aa13.3□□□□□ -0.28
COL6A1-201ENST00000361866 WDR48Q8TAF3 677 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms