RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 RASSF5Q8WWW0 418 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 HERVK_113Q902F9 699 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 SPNS1Q9H2V7 528 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 SRMSQ9H3Y6 488 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 PAK1IP1Q9NWT1 392 aaPredicted RBP10.67□□□□□ -0.7
SSU72-202ENST00000359060 SH2B3Q9UQQ2 575 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 COLEC10Q9Y6Z7 277 aa10.67□□□□□ -0.7
SSU72-202ENST00000359060 TLX2O43763 284 aaPredicted RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 SERPINI2O75830 405 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 ITGAMP11215 1152 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 AZGP1P25311 298 aaKnown RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 GJA8P48165 433 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 SOX9P48436 509 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 SLAMF1Q13291 335 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 KEAP1Q14145 624 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 PNCKQ6P2M8 343 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 USP51Q70EK9 711 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 TMIEQ8NEW7 156 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 OR5D16Q8NGK9 328 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 ZNF675Q8TD23 568 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 SLC38A4Q969I6 547 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 C1GALT1C1Q96EU7 318 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 METTL2AQ96IZ6 378 aaKnown RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 LMLNQ96KR4 655 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 C19orf43Q9BQ61 176 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 PRRG3Q9BZD7 231 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 POLR2J2Q9GZM3 115 aaKnown RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 MYNNQ9NPC7 610 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 ADAP2Q9NPF8 381 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 POLE4Q9NR33 117 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 ENPP5Q9UJA9 477 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 ACSL5Q9ULC5 683 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 FAM227AF5H4B4 570 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 CNR2P34972 360 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 ZNF776Q68DI1 518 aaPredicted RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 TANGO2Q6ICL3 276 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 FAM83HQ6ZRV2 1179 aaPredicted RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 CALHM3Q86XJ0 350 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 METTL4Q8N3J2 472 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 TMEM203Q969S6 136 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 MRGPRX3Q96LB0 322 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 BOLA2-SMG1P6H3BVE0 249 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 STK25O00506 426 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 SLC16A6O15403 523 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 NR2F6P10588 404 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 PSMA1P25786 263 aaKnown RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 MTAPQ13126 283 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 MICAQ29983 383 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 ZXDCQ2QGD7 858 aaPredicted RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 ZC3H12BQ5HYM0 836 aaKnown RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 NDUFAF5Q5TEU4 345 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 PRSS48Q7RTY5 328 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 PLPP6Q8IY26 295 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 SIPA1Q96FS4 1042 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 SAMD11Q96NU1 681 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 MAPKAP1Q9BPZ7 522 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 OR51I1Q9H343 314 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 HSPE1-MOB4S4R3N1 261 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 LILRB3O75022 631 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 SEC14L2O76054 403 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 CH25HO95992 272 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 KRT8P05787 483 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 RHCEP18577 417 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 KHKP50053 298 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 ID2Q02363 134 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 PIN1Q13526 163 aaPredicted RBP10.66□□□□□ -0.7
SSU72-202ENST00000359060 WSCD2Q2TBF2 565 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 LEXMQ3ZCV2 418 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 OLIG3Q7RTU3 272 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 CAMKK1Q8N5S9 505 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.66□□□□□ -0.7
SSU72-202ENST00000359060 KAT2AQ92830 837 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 SLC38A2Q96QD8 506 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 MIR1-1HGQ9H1L0 117 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 NDUFAF4Q9P032 175 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 GPR34Q9UPC5 381 aa10.66□□□□□ -0.7
SSU72-202ENST00000359060 NLRC5Q86WI3 1866 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 ZNF860A6NHJ4 632 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 M0R3H8 397 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 KIAA0355O15063 1070 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 SLC35G6P0C7Q6 338 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 PAICSP22234 425 aaKnown RBP10.65□□□□□ -0.7
SSU72-202ENST00000359060 CPN2P22792 545 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 MPIP34949 423 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 WNT3P56703 355 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 STXBP1P61764 594 aaKnown RBP10.65□□□□□ -0.7
SSU72-202ENST00000359060 MLLT1Q03111 559 aaPredicted RBP10.65□□□□□ -0.7
SSU72-202ENST00000359060 PPP2R2DQ66LE6 453 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 KDM4DQ6B0I6 523 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 LCTLQ6UWM7 567 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 MEX3DQ86XN8 651 aaKnown RBP10.65□□□□□ -0.7
SSU72-202ENST00000359060 HORMAD2Q8N7B1 307 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 DNASE1L2Q92874 299 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 HPS1Q92902 700 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 MUL1Q969V5 352 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 ART5Q96L15 291 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 EPYCQ99645 322 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 NRTNQ99748 197 aa10.65□□□□□ -0.7
SSU72-202ENST00000359060 ZDHHC5Q9C0B5 715 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms