RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 CRELD2Q6UXH1 353 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 CARM1Q86X55 608 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 MISPQ8IVT2 679 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ACOT12Q8WYK0 555 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 PBX4Q9BYU1 374 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 CD244Q9BZW8 370 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 FN3KQ9H479 309 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 POFUT2Q9Y2G5 429 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 QRICH2Q9H0J4 1663 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 KDM4EB2RXH2 506 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 PIM1P11309 404 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF805Q5CZA5 627 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TPGS2Q68CL5 300 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TMEM179BQ7Z7N9 219 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TCAIMQ8N3R3 496 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 MRM3Q9HC36 420 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 PCDHGA1Q9Y5H4 931 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 RIMS1Q86UR5 1692 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 MPPED1O15442 326 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ESR1P03372 595 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 LCATP04180 440 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 BMPR1AP36894 532 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 PTGIRP43119 386 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 UPP1Q16831 310 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 HSD17B8Q92506 261 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 APOOQ9BUR5 198 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 RNF38Q9H0F5 515 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 OR14J1Q9UGF5 321 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 RSL24D1Q9UHA3 163 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 LAMC1P11047 1609 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 KHKP50053 298 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 MLLT6P55198 1093 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 LCP2Q13094 533 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 CCDC58Q4VC31 144 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ADNP2Q6IQ32 1131 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 LCN10Q6JVE6 187 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 METAP1DQ6UB28 335 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF554Q86TJ5 538 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TDRPQ86YL5 185 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 MRIQ9BWK5 157 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 LOC100130705A0A1B0GUX0 176 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 A0A1B0GVI7 797 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 OR2AT4A6NND4 320 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 SOCS7O14512 581 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 BCKDHAP12694 445 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 FOXN2P32314 431 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 RPP38P78345 283 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 MFSD13AQ14CX5 517 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 FAM214AQ32MH5 1076 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 FAM205BPQ63HN1 556 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 SFRP4Q6FHJ7 346 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 OR52W1Q6IF63 320 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 HDAC2Q92769 488 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 RTKNQ9BST9 563 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 DOHHQ9BU89 302 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 KAT8Q9H7Z6 458 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TIMM50Q3ZCQ8 353 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF852Q6ZMS4 543 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 CLEC17AQ6ZS10 378 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 IKBIPQ70UQ0 350 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF551Q7Z340 670 aaPredicted RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 PIGCQ92535 297 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 GLYATL1Q969I3 302 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TMBIM1Q969X1 311 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 FCRL5Q96RD9 977 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 PAPOLGQ9BWT3 736 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 HAPLN2Q9GZV7 340 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 SCML2Q9UQR0 700 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 GPR32O75388 356 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 RDH16O75452 317 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 PRKRAO75569 313 aaKnown RBP7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ASLP04424 464 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF3P17036 446 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 CTXN1P60606 82 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 DOC2AQ14183 400 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 GRK1Q15835 563 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 MFSD2AQ8NA29 543 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TAS2R9Q9NYW1 312 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TNFRSF10DQ9UBN6 386 aa7.05□□□□□ -1.28
VPS13A-202ENST00000357409 TRBV11-1A0A0K0K1C0 115 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 PDCD5O14737 125 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 KLF11O14901 512 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 ADAMDEC1O15204 470 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 ABHD17BQ5VST6 288 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 CES4AQ5XG92 561 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 ADGRD1Q6QNK2 874 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 KHSRPQ92945 711 aaKnown RBP eCLIP7.04□□□□□ -1.281e-6■■■□□ 18.6
VPS13A-202ENST00000357409 HAPLN3Q96S86 360 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 CD180Q99467 661 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 KCPQ6ZWJ8 1503 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 ZNF888P0CJ79 500 aaPredicted RBP7.04□□□□□ -1.28
VPS13A-202ENST00000357409 ATF4P18848 351 aaPredicted RBP7.04□□□□□ -1.28
VPS13A-202ENST00000357409 PSMB10P40306 273 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 LRRC26Q2I0M4 334 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 ASRGL1Q7L266 308 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 KIAA0907Q7Z7F0 614 aaPredicted RBP7.04□□□□□ -1.28
VPS13A-202ENST00000357409 LRRTM3Q86VH5 581 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 OR9A4Q8NGU2 314 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 CEP76Q8TAP6 659 aa7.04□□□□□ -1.28
VPS13A-202ENST00000357409 WFIKKN2Q8TEU8 576 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms