RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SUV39H2Q9H5I1 410 aa12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 TEX10Q9NXF1 929 aaPredicted RBP12.23□□□□□ -0.45
SYNCRIP-201ENST00000355238 A0A1B0GVT2 93 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 C2orf74A8MZ97 194 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 M0R129 80 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 SSX4O60224 188 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 LCKP06239 509 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 CD34P28906 385 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 CD6P30203 668 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 PITPNBP48739 271 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 LASP1Q14847 261 aaKnown RBP12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 AGAP7PQ5VUJ5 663 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 KLBQ86Z14 1044 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF709Q8N972 641 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR5P2Q8WZ92 322 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 BORCS6Q96GS4 357 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 TSGA13Q96PP4 275 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 NPY6RQ99463 290 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 CD300AQ9UGN4 299 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ARL5CA6NH57 179 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 AQP9O43315 295 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF821O75541 412 aaPredicted RBP12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ALPPL2P10696 532 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 HSD3B1P14060 373 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 HSD3B2P26439 372 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ART1P52961 327 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACTBP60709 375 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACTG1P63261 375 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 CDK10Q15131 360 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 AGTRAPQ6RW13 159 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 C3P1Q6ZMU1 363 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC24A5Q71RS6 500 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 FAM86B1Q8N7N1 296 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR56A3Q8NH54 315 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 FEVQ99581 238 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 RBCK1Q9BYM8 510 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 KATNBL1Q9H079 304 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR51J1Q9H342 316 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 GRHPRQ9UBQ7 328 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ATRNL1Q5VV63 1379 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 PREX1Q8TCU6 1659 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 IRS2Q9Y4H2 1338 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 CARD16Q5EG05 197 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 FBXL22Q6P050 247 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 TMIGD1Q6UXZ0 262 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 WASH2PQ6VEQ5 465 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZDHHC14Q8IZN3 488 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 RHOXF1Q8NHV9 184 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 AGPAT4Q9NRZ5 378 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ASF1BQ9NVP2 202 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 CACNG2Q9Y698 323 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 A0A0G2JN53 185 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 IRF6O14896 467 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 TREHO43280 583 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 EIF2DP41214 584 aaKnown RBP12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ETV4P43268 484 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 RGS6P49758 472 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 MLLT10P55197 1068 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 CXCR4P61073 352 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 IRF5Q13568 498 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 MINDY4Q4G0A6 757 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 SFRP4Q6FHJ7 346 aaPredicted RBP12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 KRTCAP2Q8N6L1 136 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 LMO3Q8TAP4 145 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC5A11Q8WWX8 675 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 TREX2Q9BQ50 279 aaPredicted RBP12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 HDHD5Q9BXW7 423 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 SMOC2Q9H3U7 446 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 BCAS3Q9H6U6 928 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 DLGAP4Q9Y2H0 992 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 PCDHAC2Q9Y5I4 1007 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC38A8A6NNN8 435 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 F5H5P2 479 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 EDNRBP24530 442 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ADH7P40394 386 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 MASP1P48740 699 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 LUMP51884 338 aaPredicted RBP12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 CYCSP99999 105 aaKnown RBP12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF616Q08AN1 781 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 HACD4Q5VWC8 232 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 MCEMP1Q8IX19 187 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 SYT14Q8NB59 555 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 L3HYPDHQ96EM0 354 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 NSUN5Q96P11 429 aaKnown RBP12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 P2RY13Q9BPV8 354 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC5A7Q9GZV3 580 aa12.22□□□□□ -0.45
SYNCRIP-201ENST00000355238 TTC24A2A3L6 582 aaPredicted RBP12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR6C74A6NCV1 312 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 ARPC5O15511 151 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 IFNA5P01569 189 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 INCA1Q0VD86 236 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 GK3PQ14409 553 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 POU4F3Q15319 338 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 GPR19Q15760 415 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 SCAMP5Q8TAC9 235 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 SMPDL3AQ92484 453 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 MED30Q96HR3 178 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 GPR88Q9GZN0 384 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 OARD1Q9Y530 152 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms