RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CNPPD1Q9BV87 410 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 A4GALTQ9NPC4 353 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 ASAH2Q9NR71 780 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 V9GYH0 126 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 LILRB3O75022 631 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 S100A1P23297 94 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 RPS19P39019 145 aaKnown RBP23.35■■□□□ 1.33
CPNE1-202ENST00000352393 TAP2Q03519 686 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 NOGQ13253 232 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 ILKQ13418 452 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 SEC23BQ15437 767 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 NDUFA5Q16718 116 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 BCL7AQ4VC05 210 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 LIPIQ6XZB0 460 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 VN1R5Q7Z5H4 357 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 TMCO2Q7Z6W1 182 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-202ENST00000352393 OR9A1PQ8NGU1 263 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 CAPSLQ8WWF8 208 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 KLHL6Q8WZ60 621 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 ZNF689Q96CS4 500 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-202ENST00000352393 MRGPRX3Q96LB0 322 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 DHRS1Q96LJ7 313 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 SLX1AQ9BQ83 275 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 RSPO3Q9BXY4 272 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-202ENST00000352393 NLNQ9BYT8 704 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 EPHX3Q9H6B9 360 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.35■■□□□ 1.33
CPNE1-202ENST00000352393 DNAJC27Q9NZQ0 273 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 CLEC2DQ9UHP7 191 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 CAPN5O15484 640 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-202ENST00000352393 SEMA7AO75326 666 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 ELAVL4P26378 380 aaKnown RBP23.35■■□□□ 1.33
CPNE1-202ENST00000352393 OPRD1P41143 372 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 OR2B6P58173 313 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 SAXO2Q658L1 398 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 CEACAM20Q6UY09 585 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 UBQLNLQ8IYU4 475 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 ZNF740Q8NDX6 193 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 ASB15Q8WXK1 588 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 NEURL3Q96EH8 262 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 SLC6A18Q96N87 628 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 EXOSC4Q9NPD3 245 aaKnown RBP23.35■■□□□ 1.33
CPNE1-202ENST00000352393 MIEF1Q9NQG6 463 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 SPATA7Q9P0W8 599 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 SEC14L4Q9UDX3 406 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 MGAT4BQ9UQ53 548 aa23.35■■□□□ 1.33
CPNE1-202ENST00000352393 WBP11Q9Y2W2 641 aaKnown RBP23.35■■□□□ 1.33
CPNE1-202ENST00000352393 LILRB5O75023 590 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 ELFN1P0C7U0 828 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 CKMT1AP12532 417 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 XPAP23025 273 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-202ENST00000352393 IRS1P35568 1242 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 FEN1P39748 380 aaKnown RBP23.34■■□□□ 1.33
CPNE1-202ENST00000352393 ZNF805Q5CZA5 627 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 ZNF544Q6NX49 715 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 HORMAD2Q8N7B1 307 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 OR6F1Q8NGZ6 308 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 SLC38A5Q8WUX1 472 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 TMEM80Q96HE8 168 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 SORBS1Q9BX66 1292 aaKnown RBP23.34■■□□□ 1.33
CPNE1-202ENST00000352393 TP63Q9H3D4 680 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-202ENST00000352393 TMCC3Q9ULS5 477 aa23.34■■□□□ 1.33
CPNE1-202ENST00000352393 FAM47E-STBD1D6RA91 191 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 BCHEP06276 602 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 IGFBP1P08833 259 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-202ENST00000352393 TYRP14679 529 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 CRYBB2P43320 205 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 HTR3AP46098 478 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 COPZ1P61923 177 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 RPS26P62854 115 aaKnown RBP23.33■■□□□ 1.33
CPNE1-202ENST00000352393 GPR50Q13585 617 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 SPHARQ15513 63 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 WDR53Q7Z5U6 358 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-202ENST00000352393 GALNT6Q8NCL4 622 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 VANGL1Q8TAA9 524 aaPredicted RBP23.33■■□□□ 1.33
CPNE1-202ENST00000352393 CYB5D2Q8WUJ1 264 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 SORCS1Q8WY21 1168 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 TRMT61AQ96FX7 289 aaKnown RBP23.33■■□□□ 1.33
CPNE1-202ENST00000352393 WDFY2Q96P53 400 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 MTG2Q9H4K7 406 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 NDUFB11Q9NX14 153 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 DKK3Q9UBP4 350 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 IL36AQ9UHA7 158 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 GRIP1Q9Y3R0 1128 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 NINQ8N4C6 2090 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 LRRK1Q38SD2 2015 aa23.33■■□□□ 1.33
CPNE1-202ENST00000352393 ZNF670-ZNF695F2Z2N8 137 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 MFN2O95140 757 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 SOX14O95416 240 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 LAG3P18627 525 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 TCEA1P23193 301 aaKnown RBP23.33■■□□□ 1.32
CPNE1-202ENST00000352393 ZNF91Q05481 1191 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 POM121L1PQ3SYA9 428 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 RNLSQ5VYX0 342 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 NRARPQ7Z6K4 114 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 TRIM69Q86WT6 500 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 MMAAQ8IVH4 418 aaKnown RBP23.33■■□□□ 1.32
CPNE1-202ENST00000352393 CFAP206Q8IYR0 622 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 OR8H2Q8N162 312 aa23.33■■□□□ 1.32
CPNE1-202ENST00000352393 GPR151Q8TDV0 419 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms