RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PCDHGA7Q9Y5G6 932 aa11.64□□□□□ -0.55
SMAD9-201ENST00000350148 I6L893 689 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 JUNP05412 331 aaKnown RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 TEAD1P28347 426 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 MVKQ03426 396 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 SLAMF1Q13291 335 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 LCN1P1Q5VSP4 162 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 GPR107Q5VW38 600 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 FOXB2Q5VYV0 432 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 PGBD2Q6P3X8 592 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 TMPRSS11AQ6ZMR5 421 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 SH2D5Q6ZV89 423 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 PLXDC1Q8IUK5 500 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 OR5AR1Q8NGP9 310 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 ZFPM2Q8WW38 1151 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 ARMC1Q9NVT9 282 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 OAZ3Q9UMX2 235 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 CLCA3PQ9Y6N3 262 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 BCHEP06276 602 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 IGFALSP35858 605 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 CCNIQ14094 377 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 VEZF1Q14119 521 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 KLHL22Q53GT1 634 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 TRIM46Q7Z4K8 759 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 KRT77Q7Z794 578 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 PHC2Q8IXK0 858 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 KRTCAP2Q8N6L1 136 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 DOHHQ9BU89 302 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 NT5DC2Q9H857 520 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 NEK6Q9HC98 313 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 MGAT4BQ9UQ53 548 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 HEMK1Q9Y5R4 338 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 KLK8O60259 260 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 CTHP32929 405 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 KDELR2P33947 212 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 STARP49675 285 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 OCLNQ16625 522 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 C18orf21Q32NC0 220 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 Q6ZSR6 202 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 SLC29A4Q7RTT9 530 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 OR56A3Q8NH54 315 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 ZNF480Q8WV37 535 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 GAL3ST3Q96A11 431 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 DGCR6LQ9BY27 220 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 RSPH9Q9H1X1 276 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 NECTIN3Q9NQS3 549 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 SPATA6Q9NWH7 488 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 TMEM5Q9Y2B1 443 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 A0A0G2JN53 185 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 A0A0J9YY10 115 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 RIIAD1A6NNX1 92 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 NPR2P20594 1047 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 EFNA1P20827 205 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 GBX1Q14549 363 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 MLF2Q15773 248 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 RNF130Q86XS8 419 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 LGI4Q8N135 537 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 LRRC25Q8N386 305 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 CSNK1A1LQ8N752 337 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 OR6C4Q8NGE1 309 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 TSACCQ96A04 125 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 F2RL3Q96RI0 385 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 ZFYVE21Q9BQ24 234 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-201ENST00000350148 ABI3Q9P2A4 366 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 ZNF222Q9UK12 451 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 SCN10AQ9Y5Y9 1956 aa11.63□□□□□ -0.55
SMAD9-201ENST00000350148 MEF2AQ02078 507 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-201ENST00000350148 SIM2Q14190 667 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-201ENST00000350148 SNAPC1Q16533 368 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 PM20D2Q8IYS1 436 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 MKKSQ9NPJ1 570 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-201ENST00000350148 EDARQ9UNE0 448 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 ABCG2Q9UNQ0 655 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 OR51B4Q9Y5P0 310 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 LYVE1Q9Y5Y7 322 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 ZSCAN5BA6NJL1 495 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 HHEXQ03014 270 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 ELOAQ14241 798 aaKnown RBP11.62□□□□□ -0.55
SMAD9-201ENST00000350148 DECR1Q16698 335 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 UXS1Q8NBZ7 420 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 APIPQ96GX9 242 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 NODALQ96S42 347 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 PHF7Q9BWX1 381 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-201ENST00000350148 PTTG2Q9NZH5 202 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 MAN2B2Q9Y2E5 1009 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 PTGDR2Q9Y5Y4 395 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 CAPN3P20807 821 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 ITPKBP27987 946 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 AMZ1Q400G9 498 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 NCSTNQ92542 709 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 ZSWIM3Q96MP5 696 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 PBX4Q9BYU1 374 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 POLR2J3Q9H1A7 115 aaKnown RBP11.62□□□□□ -0.55
SMAD9-201ENST00000350148 SERHL2Q9H4I8 314 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 CLMPQ9H6B4 373 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 SMURF2Q9HAU4 748 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 SERHLQ9NQF3 203 aa11.62□□□□□ -0.55
SMAD9-201ENST00000350148 RPL36Q9Y3U8 105 aaKnown RBP11.62□□□□□ -0.55
SMAD9-201ENST00000350148 H3BQ06 376 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms