RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 KIR2DS3Q14952 304 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ZC3H12BQ5HYM0 836 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CRB2Q5IJ48 1285 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 COL13A1Q5TAT6 717 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 KIAA0895LQ68EN5 471 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 MRM1Q6IN84 353 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 C6orf120Q7Z4R8 191 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TSEN54Q7Z6J9 526 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GALNT5Q7Z7M9 940 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TRIM48Q8IWZ4 208 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SRFBP1Q8NEF9 429 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 FLVCR1-AS1Q8TAF5 88 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 NRBF2Q96F24 287 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 YTHDF1Q9BYJ9 559 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TCEAL2Q9H3H9 227 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 UBE2ZQ9H832 354 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SLC35C2Q9NQQ7 365 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 THUMPD1Q9NXG2 353 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 NDUFAF4Q9P032 175 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ANGPT4Q9Y264 503 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PCDHGA8Q9Y5G5 932 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PCDHGA2Q9Y5H1 932 aa13.39□□□□□ -0.27
CDK5RAP1-202ENST00000346416 A0A1W2PR48 441 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CCDC160A6NGH7 325 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PGRMC2O15173 223 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 DPM1O60762 260 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TNFP01375 233 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CHRNB1P11230 501 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ETS2P15036 469 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CERS1P27544 350 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 OR1E2P47887 323 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CCT3P49368 545 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TPD52P55327 224 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 STXBP1P61764 594 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RPS15AP62244 130 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 MLC1Q15049 377 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CCDC85BQ15834 202 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 IFI44LQ53G44 452 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ZNF542PQ5EBM4 170 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 KDM4DQ6B0I6 523 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 VN1R4Q7Z5H5 301 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TRIM73Q86UV7 250 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PIK3C3Q8NEB9 887 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PSMA8Q8TAA3 256 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PATE1Q8WXA2 126 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 NCSTNQ92542 709 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TMIGD2Q96BF3 282 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 AMDHD1Q96NU7 426 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 OR2A14Q96R47 310 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GPR174Q9BXC1 333 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PRO3102Q9H379 93 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GLIPR2Q9H4G4 154 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 FBXW2Q9UKT8 454 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 COMMD3-BMI1R4GMX3 469 aa13.38□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SH3BP5O60239 455 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GUCY1B2O75343 617 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 IFNA14P01570 189 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 POLR2CP19387 275 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 MAGP20916 626 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RRM2P31350 389 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RXRGP48443 463 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TDGQ13569 410 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TP53BP2Q13625 1128 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 CYP27C1Q4G0S4 372 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 REEP3Q6NUK4 255 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SYT13Q7L8C5 426 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SLC30A8Q8IWU4 369 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 KCT2Q8NC54 265 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 OR10G6Q8NH81 332 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GPBAR1Q8TDU6 330 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SLC38A5Q8WUX1 472 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 WSB2Q9NYS7 404 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RAB23Q9ULC3 237 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PCDHGB3Q9Y5G1 929 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SCN3AQ9NY46 2000 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GSAPA4D1B5 854 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 OR6C74A6NCV1 312 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 PRAMEF25A6NGN4 478 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SLC16A6O15403 523 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 B4GAT1O43505 415 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ERAL1O75616 437 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 AIFM1O95831 613 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 VIPP01282 170 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 C9P02748 559 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 UGT2B7P16662 529 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 GPC1P35052 558 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TSFMP43897 325 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 NCBP2P52298 156 aaKnown RBP eCLIP13.37□□□□□ -0.279e-8■□□□□ 10.7
CDK5RAP1-202ENST00000346416 IL1RL1Q01638 556 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 C18orf63Q68DL7 685 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 FBXO42Q6P3S6 717 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 BORAQ6PGQ7 559 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 SMYD1Q8NB12 490 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 ADAMTS16Q8TE57 1224 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 RAB8BQ92930 207 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 BBS4Q96RK4 519 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 EPYCQ99645 322 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 TWSG1Q9GZX9 223 aa13.37□□□□□ -0.27
CDK5RAP1-202ENST00000346416 VCX3AQ9NNX9 186 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms