RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 A8MT66 165 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 FGF17O60258 216 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 SMIM24O75264 130 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 EEDO75530 441 aaKnown RBP13.44□□□□□ -0.26
HMGN3-202ENST00000344726 PRKRAO75569 313 aaKnown RBP13.44□□□□□ -0.26
HMGN3-202ENST00000344726 UNC5CO95185 931 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 CLDN9O95484 217 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 RPS17P08708 135 aaKnown RBP13.44□□□□□ -0.26
HMGN3-202ENST00000344726 CPN2P22792 545 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 BSGP35613 385 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 CLCN2P51788 898 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 CCNG1P51959 295 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 RAP1GDS1P52306 607 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 HNRNPH2P55795 449 aaKnown RBP13.44□□□□□ -0.26
HMGN3-202ENST00000344726 OC90Q02509 493 aaPredicted RBP13.44□□□□□ -0.26
HMGN3-202ENST00000344726 SLAMF1Q13291 335 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 RCN2Q14257 317 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 ELAVL1Q15717 326 aaKnown RBP13.44□□□□□ -0.26
HMGN3-202ENST00000344726 C18orf63Q68DL7 685 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 GFRALQ6UXV0 394 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 C16orf47Q6ZP98 133 aaPredicted RBP13.44□□□□□ -0.26
HMGN3-202ENST00000344726 FJX1Q86VR8 437 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 ZNF321PQ8N8H1 164 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 MZB1Q8WU39 189 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 MTFMTQ96DP5 389 aaKnown RBP13.44□□□□□ -0.26
HMGN3-202ENST00000344726 VMP1Q96GC9 406 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 NTMT1Q9BV86 223 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 DEFB126Q9BYW3 111 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 SEMA4BQ9NPR2 832 aaPredicted RBP13.44□□□□□ -0.26
HMGN3-202ENST00000344726 TMEM216Q9P0N5 145 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 LRFN1Q9P244 771 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 VTI1BQ9UEU0 232 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 TMCO1Q9UM00 188 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 ATG4BQ9Y4P1 393 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 DNAJC13O75165 2243 aa13.44□□□□□ -0.26
HMGN3-202ENST00000344726 ASPDHA6ND91 283 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 FOXE1O00358 373 aaPredicted RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 TMPRSS11DO60235 418 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 ZG16O60844 167 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 IFNA16P05015 189 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 TSPAN8P19075 237 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 PTX3P26022 381 aaPredicted RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 TRHRP34981 398 aaPredicted RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 DCTP40126 519 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 CDH13P55290 713 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 STX4Q12846 297 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 CUL3Q13618 768 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 MRM1Q6IN84 353 aaKnown RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 GALNTL5Q7Z4T8 443 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 OR4N5Q8IXE1 308 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 ZCCHC7Q8N3Z6 543 aaKnown RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 DNAJB8Q8NHS0 232 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 ZNF483Q8TF39 744 aaPredicted RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 SREK1Q8WXA9 508 aaKnown RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 ATP6V1E2Q96A05 226 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 REPS1Q96D71 796 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 MTBPQ96DY7 904 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 FRMD6Q96NE9 622 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 TSPAN10Q9H1Z9 355 aaPredicted RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 TRIM45Q9H8W5 580 aaPredicted RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 LIN28AQ9H9Z2 209 aaKnown RBP13.43□□□□□ -0.26
HMGN3-202ENST00000344726 ZNF225Q9UK10 706 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 ASB4Q9Y574 426 aa13.43□□□□□ -0.26
HMGN3-202ENST00000344726 A0A0A6YYD5 115 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 WASHC1A8K0Z3 465 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 FOXO6A8MYZ6 492 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 GOLGA8RI6L899 631 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 ZNHIT1O43257 154 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 SLC25A12O75746 678 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 CRYABP02511 175 aaKnown RBP13.42□□□□□ -0.26
HMGN3-202ENST00000344726 GBAP04062 536 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 SP1P08047 785 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 CD46P15529 392 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 ARL1P40616 181 aaPredicted RBP13.42□□□□□ -0.26
HMGN3-202ENST00000344726 CYB561P49447 251 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 HLCSP50747 726 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 ARFIP1P53367 373 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 IGLV3-21P80748 117 aaPredicted RBP13.42□□□□□ -0.26
HMGN3-202ENST00000344726 TNFRSF17Q02223 184 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 RNFT1Q5M7Z0 435 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 LGSNQ5TDP6 509 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 FRG2Q64ET8 278 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 SLC25A25Q6KCM7 469 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 LETMD1Q6P1Q0 360 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 DGAT2L6Q6ZPD8 337 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 GPR180Q86V85 440 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 SIAH3Q8IW03 269 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 TMEM132CQ8N3T6 1108 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 OR4F6Q8NGB9 312 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 UCN3Q969E3 161 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 RELTQ969Z4 430 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 FRG2BQ96QU4 278 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 C1QTNF3Q9BXJ4 246 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 DDX31Q9H8H2 851 aaKnown RBP13.42□□□□□ -0.26
HMGN3-202ENST00000344726 PSD3Q9NYI0 1048 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 PSMC3IPQ9P2W1 217 aaPredicted RBP13.42□□□□□ -0.26
HMGN3-202ENST00000344726 SEC14L3Q9UDX4 400 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 FETUBQ9UGM5 382 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 TBK1Q9UHD2 729 aa13.42□□□□□ -0.26
HMGN3-202ENST00000344726 PPT2Q9UMR5 302 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms