RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 HSDL2Q6YN16 418 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 SPNS3Q6ZMD2 512 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 C16orf47Q6ZP98 133 aaPredicted RBP11.55□□□□□ -0.56
SGCA-202ENST00000344627 CEP128Q6ZU80 1094 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 ZNF572Q7Z3I7 529 aaPredicted RBP11.55□□□□□ -0.56
SGCA-202ENST00000344627 CCDC91Q7Z6B0 441 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 SULF2Q8IWU5 870 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 RNF175Q8N4F7 328 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 OR7G3Q8NG95 312 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 FAM57AQ8TBR7 257 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 AGAP11Q8TF27 550 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 ZNF473Q8WTR7 871 aaKnown RBP11.55□□□□□ -0.56
SGCA-202ENST00000344627 ASB15Q8WXK1 588 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 IFT81Q8WYA0 676 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 DMRTA2Q96SC8 542 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 MS4A8Q9BY19 250 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 ACTR8Q9H981 624 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 MCCC2Q9HCC0 563 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 TIMMDC1Q9NPL8 285 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 SNX15Q9NRS6 342 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 YARS2Q9Y2Z4 477 aaKnown RBP11.55□□□□□ -0.56
SGCA-202ENST00000344627 IKBKGQ9Y6K9 419 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 APCP25054 2843 aa11.55□□□□□ -0.56
SGCA-202ENST00000344627 A8MVJ9 347 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 C17orf105B2RV13 164 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 WWP2O00308 870 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 PRKNO60260 465 aaPredicted RBP11.54□□□□□ -0.56
SGCA-202ENST00000344627 OR2J2O76002 312 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 INHBAP08476 426 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 HIST1H1TP22492 207 aaPredicted RBP11.54□□□□□ -0.56
SGCA-202ENST00000344627 SERPINB1P30740 379 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 SERPINB8P50452 374 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 GPR85P60893 370 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 PHEXP78562 749 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 SLAMF1Q13291 335 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 SERTAD2Q14140 314 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 OR4C11Q6IEV9 310 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 GRHL2Q6ISB3 625 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 IL20RBQ6UXL0 311 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 ZNF793Q6ZN11 406 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 ACAD11Q709F0 780 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 UBE3DQ7Z6J8 389 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 ZNF227Q86WZ6 799 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 CENPLQ8N0S6 344 aaPredicted RBP11.54□□□□□ -0.56
SGCA-202ENST00000344627 ZNF295-AS1Q8N0V1 137 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 ZFP62Q8NB50 900 aaPredicted RBP11.54□□□□□ -0.56
SGCA-202ENST00000344627 HUS1BQ8NHY5 278 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 UBTD2Q8WUN7 234 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 RGMAQ96B86 450 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 SCYL1Q96KG9 808 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 MTERF1Q99551 399 aaKnown RBP11.54□□□□□ -0.56
SGCA-202ENST00000344627 SORBS1Q9BX66 1292 aaKnown RBP11.54□□□□□ -0.56
SGCA-202ENST00000344627 TP63Q9H3D4 680 aaPredicted RBP11.54□□□□□ -0.56
SGCA-202ENST00000344627 ZDHHC18Q9NUE0 388 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 HPF1Q9NWY4 346 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 NINJ2Q9NZG7 142 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 KCMF1Q9P0J7 381 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 ADGRE2Q9UHX3 823 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 ZNF223Q9UK11 482 aaPredicted RBP11.54□□□□□ -0.56
SGCA-202ENST00000344627 PPT2Q9UMR5 302 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 OTOGQ6ZRI0 2925 aa11.54□□□□□ -0.56
SGCA-202ENST00000344627 OR14I1A6ND48 311 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 LRRC14BA6NHZ5 514 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 FAM47E-STBD1D6RA91 191 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 ACOT7O00154 380 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 DYRK3O43781 588 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 HS6ST1O60243 411 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 PDE9AO76083 593 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 KLHL2O95198 593 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 ACSL3O95573 720 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 SNRPB2P08579 225 aaKnown RBP11.53□□□□□ -0.56
SGCA-202ENST00000344627 COX7A2P14406 83 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 CHRNB4P30926 498 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 TLX1P31314 330 aaPredicted RBP11.53□□□□□ -0.56
SGCA-202ENST00000344627 PTGER1P34995 402 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 PEX19P40855 299 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 RPS13P62277 151 aaKnown RBP11.53□□□□□ -0.56
SGCA-202ENST00000344627 PLGLB1Q02325 96 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 TBL3Q12788 808 aaKnown RBP11.53□□□□□ -0.56
SGCA-202ENST00000344627 BIKQ13323 160 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 GTF2H2Q13888 395 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 ACAP2Q15057 778 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 CPSF6Q16630 551 aaKnown RBP eCLIP11.53□□□□□ -0.56
SGCA-202ENST00000344627 WHAMMP3Q1A5X7 153 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 RNFT1Q5M7Z0 435 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 DEPDC1Q5TB30 811 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 KHDRBS2Q5VWX1 349 aaKnown RBP11.53□□□□□ -0.56
SGCA-202ENST00000344627 GTF2H2CQ6P1K8 395 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 C3P1Q6ZMU1 363 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 MDGA2Q7Z553 956 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 OR4N5Q8IXE1 308 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 LAS2Q8IYD9 372 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 ZNF321PQ8N8H1 164 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 MORN4Q8NDC4 146 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 MYRIPQ8NFW9 859 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 OR14A16Q8NHC5 309 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 RHEBL1Q8TAI7 183 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 SLC2A12Q8TD20 617 aa11.53□□□□□ -0.56
SGCA-202ENST00000344627 PTPMT1Q8WUK0 201 aaPredicted RBP11.53□□□□□ -0.56
SGCA-202ENST00000344627 ATP6V1E2Q96A05 226 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms