RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TCAF1Q9Y4C2 921 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PRRC2BQ5JSZ5 2229 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PTPRZ1P23471 2315 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PTPRQQ9UMZ3 2332 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SOWAHBA6NEL2 793 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TEX33O43247 280 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RPP30P78346 268 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RNLSQ5VYX0 342 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HIST2H2AA3Q6FI13 130 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZBTB46Q86UZ6 589 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 C7orf61Q8IZ16 206 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MAPKAP1Q9BPZ7 522 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PCDHAC1Q9H158 963 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MAGIXQ9H6Y5 334 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZDHHC11Q9H8X9 412 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZIM2Q9NZV7 527 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RAP2CQ9Y3L5 183 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MED12Q93074 2177 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 EDC4Q6P2E9 1401 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RPLP1P05386 114 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 USP17L7P0C7H9 530 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CSH1P0DML2 217 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CSH2P0DML3 217 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HSD17B1P14061 328 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 OR10K2Q6IF99 312 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 FAM71E1Q6IPT2 247 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SLC34A3Q8N130 599 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GRIN3AQ8TCU5 1115 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MASTLQ96GX5 879 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PRMT6Q96LA8 375 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SPACA1Q9HBV2 294 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DZANK1Q9NVP4 752 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 COPS3Q9UNS2 423 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 IFNA5P01569 189 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 COMTP21964 271 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DBPQ10586 325 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 FAM180AQ6UWF9 173 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF808Q8N4W9 903 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 STK35Q8TDR2 534 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 IMP4Q96G21 291 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DHRS4Q9BTZ2 278 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HMX1Q9NP08 348 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RASL12Q9NYN1 266 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 E7EWF7 191 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 NEMP1O14524 444 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SRPRAP08240 638 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CPA2P48052 419 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ACTA2P62736 377 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ACTG2P63267 376 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ACTC1P68032 377 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ACTA1P68133 377 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HIST1H3AP68431 136 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RHBDF2Q6PJF5 856 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 C1orf87Q8N0U7 546 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 AUTS2Q8WXX7 1259 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TLR8Q9NR97 1041 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ELOVL2Q9NXB9 296 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RIMS3Q9UJD0 308 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ADAM29Q9UKF5 820 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ALG6Q9Y672 507 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DOCK10Q96BY6 2186 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 AMHP03971 560 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GLULP15104 373 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 INCA1Q0VD86 236 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DAG1Q14118 895 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TBCEQ15813 527 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF470Q6ECI4 717 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ADGRF4Q8IZF3 695 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ADGRF3Q8IZF5 1079 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ORAI1Q96D31 301 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF558Q96NG5 402 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ELP3Q9H9T3 547 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 FBXO10Q9UK96 956 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PCDHA9Q9Y5H5 950 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ESPL1Q14674 2120 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TRAV20A0A0B4J274 112 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 S1PR4O95977 384 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SHBGP04278 402 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TPH1P17752 444 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GM2AP17900 193 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MAP3K8P41279 467 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SOX9P48436 509 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PPT1P50897 306 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TGFB2P61812 414 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RRAS2P62070 204 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ETNPPLQ8TBG4 499 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ST8SIA4Q92187 359 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PHF21BQ96EK2 531 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ASB16Q96NS5 453 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RNF150Q9ULK6 438 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 NRCAMQ92823 1304 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DNPH1O43598 174 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 F3P13726 295 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CBR1P16152 277 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 KEAP1Q14145 624 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MEDAGQ5VYS4 303 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ARL9Q6T311 187 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF720Q7Z2F6 126 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DPY19L4Q7Z388 723 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms