RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 HLA-DQB1P01920 261 aa19.24■□□□□ 0.67
UBC-201ENST00000339647 HIST1H2AGP0C0S8 130 aaPredicted RBP19.24■□□□□ 0.67
UBC-201ENST00000339647 HIST1H2ADP20671 130 aa19.24■□□□□ 0.67
UBC-201ENST00000339647 IL18Q14116 193 aa19.24■□□□□ 0.67
UBC-201ENST00000339647 DNAJA4Q8WW22 397 aaPredicted RBP19.24■□□□□ 0.67
UBC-201ENST00000339647 HIST1H2AHQ96KK5 128 aa19.24■□□□□ 0.67
UBC-201ENST00000339647 HYLS1Q96M11 299 aa19.24■□□□□ 0.67
UBC-201ENST00000339647 HIST1H2AJQ99878 128 aa19.24■□□□□ 0.67
UBC-201ENST00000339647 SLC35A5Q9BS91 424 aa19.24■□□□□ 0.67
UBC-201ENST00000339647 H2AFJQ9BTM1 129 aa19.24■□□□□ 0.67
UBC-201ENST00000339647 NUP50Q9UKX7 468 aa19.24■□□□□ 0.67
UBC-201ENST00000339647 STK19P49842 368 aaPredicted RBP19.23■□□□□ 0.67
UBC-201ENST00000339647 AGFG1P52594 562 aaKnown RBP19.23■□□□□ 0.67
UBC-201ENST00000339647 CDK6Q00534 326 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 RBBP4Q09028 425 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 SEC23BQ15437 767 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 CRTC2Q53ET0 693 aaPredicted RBP19.23■□□□□ 0.67
UBC-201ENST00000339647 NXPE1Q8N323 547 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 PCNPQ8WW12 178 aaKnown RBP19.23■□□□□ 0.67
UBC-201ENST00000339647 SLC12A9Q9BXP2 914 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 PAK6Q9NQU5 681 aaPredicted RBP19.23■□□□□ 0.67
UBC-201ENST00000339647 EVA1BQ9NVM1 165 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 ZNF282Q9UDV7 671 aaPredicted RBP19.23■□□□□ 0.67
UBC-201ENST00000339647 ITM2BQ9Y287 266 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 A0A0U1RQF3 1178 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 ISM1B1AKI9 464 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 I3L521 148 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 K7ERQ8 282 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 BTN3A3O00478 584 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 C6orf47O95873 294 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 KLKB1P03952 638 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 OSMP13725 252 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 DDX5P17844 614 aaKnown RBP19.23■□□□□ 0.67
UBC-201ENST00000339647 TNNI3P19429 210 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 PTGS2P35354 604 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 LIM2P55344 173 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 PER3P56645 1201 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 UBE3AQ05086 875 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 XKR6Q5GH73 641 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 OR2G6Q5TZ20 316 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 ANKRD54Q6NXT1 300 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 IQCF1Q8N6M8 205 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 WDR20Q8TBZ3 569 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 UROC1Q96N76 676 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 C17orf62Q9BQA9 187 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 C1QTNF7Q9BXJ2 289 aa19.23■□□□□ 0.67
UBC-201ENST00000339647 EXO1Q9UQ84 846 aaKnown RBP19.23■□□□□ 0.67
UBC-201ENST00000339647 INMT-MINDY4F8WBC2 141 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 ORC5O43913 435 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 SLC43A1O75387 559 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 GJB5O95377 273 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 CPEP16870 476 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 SLC11A2P49281 568 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 PFN3P60673 137 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 PURAQ00577 322 aaKnown RBP19.22■□□□□ 0.67
UBC-201ENST00000339647 CCDC85BQ15834 202 aaPredicted RBP19.22■□□□□ 0.67
UBC-201ENST00000339647 TMEM201Q5SNT2 666 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 ANXA8L1Q5VT79 327 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 GDF6Q6KF10 455 aaPredicted RBP19.22■□□□□ 0.67
UBC-201ENST00000339647 PLEKHH3Q7Z736 793 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 HOMEZQ8IX15 550 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 HUS1BQ8NHY5 278 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 TM9SF4Q92544 642 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 AKAP1Q92667 903 aaKnown RBP eCLIP19.22■□□□□ 0.67
UBC-201ENST00000339647 C11orf24Q96F05 449 aaPredicted RBP19.22■□□□□ 0.67
UBC-201ENST00000339647 SOSTQ9BQB4 213 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 TRAF4Q9BUZ4 470 aaPredicted RBP19.22■□□□□ 0.67
UBC-201ENST00000339647 C1GALT1Q9NS00 363 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 SPATA6Q9NWH7 488 aaPredicted RBP19.22■□□□□ 0.67
UBC-201ENST00000339647 POLHQ9Y253 713 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 SERTM1A2A2V5 107 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 LINC00862A6NCI5 91 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 MGAT4DA6NG13 374 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 PDPK1O15530 556 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 PCSK2P16519 638 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 RHCEP18577 417 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 GSTM5P46439 218 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 MRPL58Q14197 206 aaKnown RBP19.22■□□□□ 0.67
UBC-201ENST00000339647 LRRC32Q14392 662 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 CXorf57Q6NSI4 855 aaKnown RBP19.22■□□□□ 0.67
UBC-201ENST00000339647 CASP12Q6UXS9 341 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 OR52I1Q8NGK6 324 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 MARVELD3Q96A59 401 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 SAMD11Q96NU1 681 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 WACQ9BTA9 647 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 TMEM43Q9BTV4 400 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 ZSCAN5AQ9BUG6 496 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 KATNAL1Q9BW62 490 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 B3GNT4Q9C0J1 378 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 AP5M1Q9H0R1 490 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 PCDHGB7Q9Y5F8 929 aa19.22■□□□□ 0.67
UBC-201ENST00000339647 GNG14A0A1W2PPG7 69 aa19.21■□□□□ 0.67
UBC-201ENST00000339647 GLTPD2A6NH11 291 aa19.21■□□□□ 0.67
UBC-201ENST00000339647 GTPBP1O00178 669 aaKnown RBP19.21■□□□□ 0.67
UBC-201ENST00000339647 RFPL3O75679 317 aa19.21■□□□□ 0.67
UBC-201ENST00000339647 NCR1O76036 304 aa19.21■□□□□ 0.67
UBC-201ENST00000339647 GBAP04062 536 aa19.21■□□□□ 0.67
UBC-201ENST00000339647 HNF1BP35680 557 aa19.21■□□□□ 0.67
UBC-201ENST00000339647 C21orf58P58505 322 aa19.21■□□□□ 0.67
UBC-201ENST00000339647 EEF1A2Q05639 463 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms