RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 GLYATL2Q8WU03 294 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 PCED1BQ96HM7 432 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 HNRNPABQ99729 332 aaKnown RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 PIP5K1AQ99755 562 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 PDZD7Q9H5P4 517 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 ELOVL2Q9NXB9 296 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 ABCA9Q8IUA7 1624 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 FAAHO00519 579 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 ASPAP45381 313 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 RPS13P62277 151 aaKnown RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 LRRC32Q14392 662 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 MLIPQ5VWP3 458 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 TXNRD3NBQ6F5E7 133 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 TICAM1Q8IUC6 712 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 NINJ1Q92982 152 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 DGAT2Q96PD7 388 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 ADAM7Q9H2U9 754 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 CNOT11Q9UKZ1 510 aaKnown RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 SARDHQ9UL12 918 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 PTPRMP28827 1452 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 GXYLT2A0PJZ3 443 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 SCDO00767 359 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 DAOAP59103 153 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 NIPAL4Q0D2K0 466 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 PPA1Q15181 289 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 THAP4Q8WY91 577 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 SLC41A3Q96GZ6 507 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 MSLNLQ96KJ4 702 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 FAM83CQ9BQN1 747 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 EFCAB11Q9BUY7 163 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 A0A1W2PPL8 197 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 CXCL11O14625 94 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 UCHL1P09936 223 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 CD6P30203 668 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 CAPZA1P52907 286 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 ART1P52961 327 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 DNAJB13P59910 316 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 NPRL3Q12980 569 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 CEACAM7Q14002 265 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 SLC22A10Q63ZE4 541 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 REEP3Q6NUK4 255 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 SLC27A4Q6P1M0 643 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 FIP1L1Q6UN15 594 aaKnown RBP9.44□□□□□ -0.9
COL4A6-201ENST00000334504 C12orf40Q86WS4 652 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 NUBP2Q9Y5Y2 271 aa9.44□□□□□ -0.9
COL4A6-201ENST00000334504 UNC119BA6NIH7 251 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 SNAPINO95295 136 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 MAS1P04201 325 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 AMY2AP04746 511 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 DNAJB1P25685 340 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 SSTR2P30874 369 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 AFF3P51826 1226 aaKnown RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 GPAT4Q86UL3 456 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 FAM86B1Q8N7N1 296 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 OR56A3Q8NH54 315 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 PAQR8Q8TEZ7 354 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 RAB8BQ92930 207 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ARL5BQ96KC2 179 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 DERL2Q9GZP9 239 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 EPHX1P07099 455 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ALPIP09923 528 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 MAGEB1P43366 347 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 CRISP1P54107 249 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 DIO3P55073 304 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 LASP1Q14847 261 aaKnown RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ATG9BQ674R7 924 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 C3P1Q6ZMU1 363 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 IGDCC3Q8IVU1 814 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 OR56A1Q8NGH5 318 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 PRR11Q96HE9 360 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 RPL10LQ96L21 214 aaKnown RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ZDHHC3Q9NYG2 299 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ADAMTS13Q76LX8 1427 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 KLRG2A4D1S0 409 aaPredicted RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ZNF850A8MQ14 1090 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 RAD51DO75771 328 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ADH1AP07327 375 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 CD3GP09693 182 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 LMO2P25791 158 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 ABHD15Q6UXT9 468 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 KCTD20Q7Z5Y7 419 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 CDKN2AIPNLQ96HQ2 116 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 SAMD11Q96NU1 681 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 MCHR1Q99705 422 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 TTPALQ9BTX7 342 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 MCCC2Q9HCC0 563 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 KLHL9Q9P2J3 617 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 LSM5Q9Y4Y9 91 aaKnown RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 CACNG2Q9Y698 323 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 TRBV2A0A0J9YWF9 115 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 PRSS51A0A1B0GVH4 220 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 K7EPK0 472 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 CASC3O15234 703 aaKnown RBP9.43□□□□□ -0.9
COL4A6-201ENST00000334504 TNFSF12O43508 249 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 S1PR1P21453 382 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 BDKRB2P30411 391 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 GRPRP30550 384 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 CA5AP35218 305 aa9.43□□□□□ -0.9
COL4A6-201ENST00000334504 GJA5P36382 358 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms