RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 NUDT13Q86X67 352 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 COL27A1Q8IZC6 1860 aaPredicted RBP9.01□□□□□ -0.97
C11orf54-201ENST00000331239 ARHGEF39Q8N4T4 335 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 CSNK1A1LQ8N752 337 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 TSPAN14Q8NG11 270 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 MPP4Q96JB8 637 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SERINC2Q96SA4 455 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 DPH2Q9BQC3 489 aaPredicted RBP9.01□□□□□ -0.97
C11orf54-201ENST00000331239 NUDT22Q9BRQ3 303 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 REXO4Q9GZR2 422 aaKnown RBP9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SPNS1Q9H2V7 528 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 MUC13Q9H3R2 512 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SOHLH2Q9NX45 425 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SIDT1Q9NXL6 827 aaKnown RBP9.01□□□□□ -0.97
C11orf54-201ENST00000331239 EGFL7Q9UHF1 273 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 MUC6Q6W4X9 2439 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SAC3D1A6NKF1 404 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 H0YIG0 161 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 H3BMH7 237 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SOCS2O14508 198 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SEC22BO75396 215 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 H6PDO95479 791 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 GPIP06744 558 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 CD63P08962 238 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 DRD2P14416 443 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 TIA1P31483 386 aaKnown RBP eCLIP9.01□□□□□ -0.97
C11orf54-201ENST00000331239 CSTF2P33240 577 aaKnown RBP eCLIP9.01□□□□□ -0.972e-8■■■■□ 23.8
C11orf54-201ENST00000331239 HTR6P50406 440 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 HYAL2Q12891 473 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 NFYCQ13952 458 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 INTS11Q5TA45 600 aaKnown RBP9.01□□□□□ -0.97
C11orf54-201ENST00000331239 USP53Q70EK8 1073 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 TMPRSS12Q86WS5 348 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SPPL2CQ8IUH8 684 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 ZNF740Q8NDX6 193 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 DNAJB8Q8NHS0 232 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 FAM110BQ8TC76 370 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 PROKR1Q8TCW9 393 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 RMND5BQ96G75 393 aaPredicted RBP9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SLC45A3Q96JT2 553 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 CCDC74BQ96LY2 380 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 LRFN5Q96NI6 719 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 MTERF1Q99551 399 aaKnown RBP9.01□□□□□ -0.97
C11orf54-201ENST00000331239 ARPC5LQ9BPX5 153 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 MFRPQ9BY79 579 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 MYNNQ9NPC7 610 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 SLC52A3Q9NQ40 469 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 AGPAT4Q9NRZ5 378 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 EHD3Q9NZN3 535 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 PHF11Q9UIL8 331 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 MYRFQ9Y2G1 1151 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 PCDHA9Q9Y5H5 950 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 ASXL3Q9C0F0 2248 aa9.01□□□□□ -0.97
C11orf54-201ENST00000331239 ADAMTS20P59510 1910 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 FEZF1A0PJY2 475 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 EEDO75530 441 aaKnown RBP9□□□□□ -0.97
C11orf54-201ENST00000331239 TBX6O95947 436 aaPredicted RBP9□□□□□ -0.97
C11orf54-201ENST00000331239 IFI6P09912 130 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 ZNF23P17027 643 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 PRPS1L1P21108 318 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 JAK1P23458 1154 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 BSGP35613 385 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 PPM1FP49593 454 aaPredicted RBP9□□□□□ -0.97
C11orf54-201ENST00000331239 NHSL2Q5HYW2 709 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 NOXRED1Q6NXP6 359 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 IGF2-ASQ6U949 168 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 ASCL5Q7RTU5 278 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 R3HCC1LQ7Z5L2 792 aaKnown RBP9□□□□□ -0.97
C11orf54-201ENST00000331239 GPR135Q8IZ08 494 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 SAMD14Q8IZD0 417 aaPredicted RBP9□□□□□ -0.97
C11orf54-201ENST00000331239 ADGRG5Q8IZF4 528 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 DCBLD1Q8N8Z6 715 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 OR2T11Q8NH01 316 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 ZFP28Q8NHY6 868 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 TMEM125Q96AQ2 219 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 DTNBP1Q96EV8 351 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 NRTNQ99748 197 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 ZNF232Q9UNY5 417 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 GPR179Q6PRD1 2367 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 A0A0J9YVX5 310 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 ASPDHA6ND91 283 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 H3BNH8 94 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 TPST1O60507 370 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 NSA2O95478 260 aaKnown RBP9□□□□□ -0.97
C11orf54-201ENST00000331239 FCGR1AP12314 374 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 HOXB3P14651 431 aaPredicted RBP9□□□□□ -0.97
C11orf54-201ENST00000331239 ALOX12P18054 663 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 FASP25445 335 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 GSK3BP49841 420 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 NEK2P51955 445 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 CLDN8P56748 225 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 TIGD2Q4W5G0 525 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 CAMKMTQ7Z624 323 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 EPHX4Q8IUS5 362 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 CBR4Q8N4T8 237 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 FNDC5Q8NAU1 212 aa9□□□□□ -0.97
C11orf54-201ENST00000331239 PUM2Q8TB72 1066 aaKnown RBP eCLIP9□□□□□ -0.97
C11orf54-201ENST00000331239 UTP15Q8TED0 518 aaKnown RBP9□□□□□ -0.97
C11orf54-201ENST00000331239 VPS33AQ96AX1 596 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms