RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 GUCD1Q96NT3 240 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 AMDHD1Q96NU7 426 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 OSBPL10Q9BXB5 764 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 KLHL25Q9H0H3 589 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 TM9SF3Q9HD45 589 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 PNPLA3Q9NST1 481 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 EVA1BQ9NVM1 165 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 VNN3Q9NY84 501 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 USE1Q9NZ43 259 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 BAG5Q9UL15 447 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 PADI4Q9UM07 663 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 KNL1Q8NG31 2342 aa14.15□□□□□ -0.14
TPM3-205ENST00000328159 A0A0J9YY10 115 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 WASHC1A8K0Z3 465 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 TMEM229AB2RXF0 380 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 B4DGG1 531 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 PGRMC2O15173 223 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 P2RX6O15547 441 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 ALBP02768 609 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 THRBP10828 461 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 KCNJ10P78508 379 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 ADARB1P78563 741 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 VLDLRP98155 873 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 HHEXQ03014 270 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 PPP1R8Q12972 351 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 ELOAQ14241 798 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 DGLUCYQ7Z3D6 616 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 C6orf120Q7Z4R8 191 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 ZNF761Q86XN6 746 aaPredicted RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 HIPK1Q86Z02 1210 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 SLC30A8Q8IWU4 369 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 HS3ST5Q8IZT8 346 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 HORMAD2Q8N7B1 307 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 FBXL20Q96IG2 436 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 BBS4Q96RK4 519 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 RBM4BQ9BQ04 359 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 DOHHQ9BU89 302 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 RBM4Q9BWF3 364 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 ROGDIQ9GZN7 287 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 GLIPR2Q9H4G4 154 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 TBC1D17Q9HA65 648 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 SMURF2Q9HAU4 748 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 ANGPT4Q9Y264 503 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 SCN3AQ9NY46 2000 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 MYO1GB0I1T2 1018 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 PROM1O43490 865 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 B4GALT2O60909 372 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 ERAL1O75616 437 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 CSF2P04141 144 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 LINGO3P0C6S8 592 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 PVRP15151 417 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 NELFEP18615 380 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 CCT3P49368 545 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 NCBP2P52298 156 aaKnown RBP eCLIP14.14□□□□□ -0.15
TPM3-205ENST00000328159 RPS26P62854 115 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 SELENOWP63302 87 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 PPP2R2BQ00005 443 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 C18orf63Q68DL7 685 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 SLC48A1Q6P1K1 146 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 SHQ1Q6PI26 577 aaKnown RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 CEACAM20Q6UY09 585 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 IQCHQ86VS3 1027 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 OOSP2Q86WS3 158 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 CAMKVQ8NCB2 501 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 BAHD1Q8TBE0 780 aaPredicted RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 TAMM41Q96BW9 452 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 C7orf34Q96L11 122 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 RDH12Q96NR8 316 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 MAPKAP1Q9BPZ7 522 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 ZFYVE21Q9BQ24 234 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 ZSCAN32Q9NX65 697 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 IFT80Q9P2H3 777 aaPredicted RBP14.14□□□□□ -0.15
TPM3-205ENST00000328159 CES1P1Q9UKY3 287 aa14.14□□□□□ -0.15
TPM3-205ENST00000328159 CEP192Q8TEP8 1941 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 MYOCOSA0A1B0GUC4 107 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 OR5K3A6NET4 321 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 URADA6NGE7 173 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 H0YAE9 185 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 M0QX08 132 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 TLR4O00206 839 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 DIRAS1O95057 198 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 OPN1SWP03999 348 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 SMIM10L1P0DMW3 83 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 NME1P15531 152 aaKnown RBP14.13□□□□□ -0.15
TPM3-205ENST00000328159 MAOBP27338 520 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 GPC1P35052 558 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 ITGA1P56199 1179 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 PCBP3P57721 371 aaKnown RBP14.13□□□□□ -0.15
TPM3-205ENST00000328159 RACK1P63244 317 aaKnown RBP14.13□□□□□ -0.15
TPM3-205ENST00000328159 RPL6Q02878 288 aaKnown RBP14.13□□□□□ -0.15
TPM3-205ENST00000328159 ZP2Q05996 745 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 SUZ12Q15022 739 aaKnown RBP14.13□□□□□ -0.15
TPM3-205ENST00000328159 ELOCQ15369 112 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 ZIK1Q3SY52 487 aaPredicted RBP14.13□□□□□ -0.15
TPM3-205ENST00000328159 CRB2Q5IJ48 1285 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 FRMPD2BQ6IN97 320 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 TNFAIP8L2Q6P589 184 aaPredicted RBP14.13□□□□□ -0.15
TPM3-205ENST00000328159 CAMKK1Q8N5S9 505 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 ZCCHC10Q8TBK6 192 aa14.13□□□□□ -0.15
TPM3-205ENST00000328159 CLDN23Q96B33 292 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms