RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 ATOH8Q96SQ7 321 aa16.43■□□□□ 0.22
PTPMT1-201ENST00000326656 CENPKQ9BS16 269 aa16.43■□□□□ 0.22
PTPMT1-201ENST00000326656 OR8D2Q9GZM6 311 aa16.43■□□□□ 0.22
PTPMT1-201ENST00000326656 ENKD1Q9H0I2 346 aa16.43■□□□□ 0.22
PTPMT1-201ENST00000326656 PYCARDQ9ULZ3 195 aa16.43■□□□□ 0.22
PTPMT1-201ENST00000326656 ACOT9Q9Y305 439 aa16.43■□□□□ 0.22
PTPMT1-201ENST00000326656 C17orf105B2RV13 164 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 DYRK3O43781 588 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 OR6B1O95007 311 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 POU3F2P20265 443 aaPredicted RBP16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 CNR1P21554 472 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 KIR3DL1P43629 444 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 HK2P52789 917 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 GPR85P60893 370 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 IGLV3-21P80748 117 aaPredicted RBP16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 TBL3Q12788 808 aaKnown RBP16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 CDSNQ15517 529 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 KHDRBS2Q5VWX1 349 aaKnown RBP16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 OR4C11Q6IEV9 310 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 IL20RBQ6UXL0 311 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 ZNF793Q6ZN11 406 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 GK5Q6ZS86 529 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 SLC22A16Q86VW1 577 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 OR2M7Q8NG81 312 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 TANKQ92844 425 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 SDCCAG3Q96C92 435 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 MAPKAP1Q9BPZ7 522 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 TREX2Q9BQ50 279 aaPredicted RBP16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 FAM173AQ9BQD7 235 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 ZDHHC11Q9H8X9 412 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 DEPPQ9NTK1 212 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 COPS7AQ9UBW8 275 aa16.42■□□□□ 0.22
PTPMT1-201ENST00000326656 POLQO75417 2590 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 DNAJC13O75165 2243 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 ZNF407Q9C0G0 2248 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 OR14I1A6ND48 311 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 C19orf84I3L1E1 186 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 WWP2O00308 870 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 CDC40O60508 579 aaKnown RBP eCLIP16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 SNRPB2P08579 225 aaKnown RBP16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 CPN2P22792 545 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 TLX1P31314 330 aaPredicted RBP16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 RFC3P40938 356 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 SOX3P41225 446 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 PPIAP62937 165 aaKnown RBP16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 GUCY2DQ02846 1103 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 FAM83EQ2M2I3 478 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 HYAL4Q2M3T9 481 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 LIPJQ5W064 366 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 GRHL2Q6ISB3 625 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 METTL2BQ6P1Q9 378 aaKnown RBP16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 C3P1Q6ZMU1 363 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 C16orf47Q6ZP98 133 aaPredicted RBP16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 CD163Q86VB7 1156 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 OR52N2Q8NGI0 321 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 LILRB4Q8NHJ6 448 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 FBXO25Q8TCJ0 367 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 SLC2A12Q8TD20 617 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 RGMAQ96B86 450 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 ANKRD9Q96BM1 317 aaPredicted RBP16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 RBM18Q96H35 190 aaKnown RBP16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 IGSF5Q9NSI5 407 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 PSD3Q9NYI0 1048 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 PCDHGA11Q9Y5H2 935 aa16.41■□□□□ 0.22
PTPMT1-201ENST00000326656 CCDC168Q8NDH2 2452 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 A0A087X1B8 175 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 SUPT3HB4E1H0 165 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 ZNHIT1O43257 154 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 UGDHO60701 494 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 LDB3O75112 727 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 SUPT3HO75486 399 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 GLSO94925 669 aaPredicted RBP16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 TGFB1P01137 390 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 PCNAP12004 261 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 MTHFD2P13995 350 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 PTX3P26022 381 aaPredicted RBP16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 CHRNB4P30926 498 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 SSR2P43308 183 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 STT3AP46977 705 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 PLGLB1Q02325 96 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 DLG1Q12959 904 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 SLAMF1Q13291 335 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 SLMAPQ14BN4 828 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 ACAD11Q709F0 780 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 CMC1Q7Z7K0 106 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 ZCCHC7Q8N3Z6 543 aaKnown RBP16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 SLC15A4Q8N697 577 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 NUBPLQ8TB37 319 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 FBF1Q8TES7 1133 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 ZNF721Q8TF20 911 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 RND1Q92730 232 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 EXT2Q93063 718 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 REPS1Q96D71 796 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 SENP5Q96HI0 755 aaPredicted RBP16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 ART5Q96L15 291 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 DEFB127Q9H1M4 99 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 RPF2Q9H7B2 306 aaKnown RBP16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 LIN28AQ9H9Z2 209 aaKnown RBP16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 IL1RL2Q9HB29 575 aa16.4■□□□□ 0.22
PTPMT1-201ENST00000326656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 584.7 ms