RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 CTSVO60911 334 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 H6PDO95479 791 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 GSNP06396 782 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 RPS4Y1P22090 263 aaKnown RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 ERFP50548 548 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 GABARAPL2P60520 117 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 STXBP1P61764 594 aaKnown RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 VLDLRP98155 873 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 TNFRSF17Q02223 184 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 PRTGQ2VWP7 1150 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 GCNT6Q5T4J0 391 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 ZNF691Q5VV52 312 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 KIAA1324Q6UXG2 1013 aaKnown RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 USP53Q70EK8 1073 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 PHF10Q8WUB8 498 aaKnown RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 FIG4Q92562 907 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 AMBRA1Q9C0C7 1298 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 GRIP2Q9C0E4 1043 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 EPHA6Q9UF33 1036 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 ABCG2Q9UNQ0 655 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 COLQQ9Y215 455 aaPredicted RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 MRPS17Q9Y2R5 130 aaKnown RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 PCDHGB1Q9Y5G3 927 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 EYSQ5T1H1 3165 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 GNG14A0A1W2PPG7 69 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 EI24O14681 340 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 P2RX6O15547 441 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 MFN2O95140 757 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 CPNE6O95741 557 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 GALNSP34059 522 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 ATXN3P54252 364 aaPredicted RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 DUSP2Q05923 314 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 RBBP5Q15291 538 aaKnown RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 RFX4Q33E94 735 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 CNPY1Q3B7I2 92 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 NDUFAF5Q5TEU4 345 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 OR2T5Q6IEZ7 315 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 TRIM40Q6P9F5 258 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 ASPGQ86U10 573 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 TBC1D19Q8N5T2 526 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 OR2T29Q8NH02 315 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 ZNF675Q8TD23 568 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 GFM2Q969S9 779 aaKnown RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 CTHRC1Q96CG8 243 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 CNRIP1Q96F85 164 aaPredicted RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 SHDQ96IW2 340 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 ZNF347Q96SE7 839 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 TCEAL2Q9H3H9 227 aaPredicted RBP6.79□□□□□ -1.32
NPHP1-201ENST00000316534 SEMA6CQ9H3T2 930 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 SLC35C2Q9NQQ7 365 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 NDUFAF4Q9P032 175 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 SCOCQ9UIL1 159 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 CSNK1G3Q9Y6M4 447 aa6.79□□□□□ -1.32
NPHP1-201ENST00000316534 C2orf74A8MZ97 194 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ZNF701M0R085 212 aaPredicted RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 CYR61O00622 381 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 AXIN1O15169 862 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 GUCY1B2O75343 617 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 AIFM1O95831 613 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 EPPINO95925 133 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 GIMD1P0DJR0 217 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ZNF23P17027 643 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 JUNDP17535 347 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 FPR1P21462 350 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 DNAJA1P31689 397 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 BLKP51451 505 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 RACK1P63244 317 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 MGAT2Q10469 447 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 DDX39BQ13838 428 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 TMEM26Q6ZUK4 368 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 PMM1Q92871 262 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 UCN3Q969E3 161 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 FAM162AQ96A26 154 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ZBED6CLQ96FA7 236 aaPredicted RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 HSH2DQ96JZ2 352 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 SAP130Q9H0E3 1048 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 DDX18Q9NVP1 670 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 FKBP14Q9NWM8 211 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 NDUFA13Q9P0J0 144 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 NDRG4Q9ULP0 352 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 PRRC2BQ5JSZ5 2229 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 A0A087WV62 115 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 G3V2T6 193 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 SAP18O00422 153 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ZSCAN9O15535 394 aaPredicted RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ATP1B1P05026 303 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 FABP3P05413 133 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 CELA2BP08218 269 aaPredicted RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 CXCR4P61073 352 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 LRRC36Q1X8D7 754 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 PRRT3Q5FWE3 981 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 TOR1AIP1Q5JTV8 583 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 PTCRAQ6ISU1 281 aaPredicted RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ZCCHC8Q6NZY4 707 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ZNF621Q6ZSS3 439 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 OR2L13Q8N349 312 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 PNPT1Q8TCS8 783 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 SLC37A2Q8TED4 501 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 LCN9Q8WX39 176 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms