RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 MYNNQ9NPC7 610 aa14.29□□□□□ -0.12
CCDC140-201ENST00000295226 SDR39U1Q9NRG7 319 aaPredicted RBP14.29□□□□□ -0.12
CCDC140-201ENST00000295226 TRABD2BA6NFA1 517 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 CYR61O00622 381 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 B4GALT2O60909 372 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 ACPPP15309 386 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 RBMS1P29558 406 aaKnown RBP14.28□□□□□ -0.12
CCDC140-201ENST00000295226 CLDN8P56748 225 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 MXRA7P84157 204 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 ID2Q02363 134 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 DSG2Q14126 1118 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 TRMT5Q32P41 509 aaKnown RBP14.28□□□□□ -0.12
CCDC140-201ENST00000295226 NET1Q7Z628 596 aaPredicted RBP14.28□□□□□ -0.12
CCDC140-201ENST00000295226 OR4N5Q8IXE1 308 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 MIER2Q8N344 545 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 RBM15BQ8NDT2 890 aaKnown RBP14.28□□□□□ -0.12
CCDC140-201ENST00000295226 OR7A2PQ8NGA2 310 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 PROKR1Q8TCW9 393 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 NPLQ9BXD5 320 aaPredicted RBP14.28□□□□□ -0.12
CCDC140-201ENST00000295226 DPY30Q9C005 99 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 LYRM4Q9HD34 91 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 LYARQ9NX58 379 aaKnown RBP14.28□□□□□ -0.12
CCDC140-201ENST00000295226 CCDC167Q9P0B6 97 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 AK5Q9Y6K8 562 aa14.28□□□□□ -0.12
CCDC140-201ENST00000295226 A0A1W2PS29 197 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 GABRR3A8MPY1 467 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 NVLO15381 856 aaKnown RBP14.27□□□□□ -0.12
CCDC140-201ENST00000295226 SLC22A3O75751 556 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 DLGAP3O95886 979 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 KLK3P07288 261 aaPredicted RBP14.27□□□□□ -0.12
CCDC140-201ENST00000295226 RNH1P13489 461 aaKnown RBP14.27□□□□□ -0.12
CCDC140-201ENST00000295226 EFNA1P20827 205 aaPredicted RBP14.27□□□□□ -0.12
CCDC140-201ENST00000295226 RAB38P57729 211 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 STX1BP61266 288 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 SKP1P63208 163 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 BTG2P78543 158 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 KLC1Q07866 573 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 SQLEQ14534 574 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 ZNF750Q32MQ0 723 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 PDCD4Q53EL6 469 aaKnown RBP14.27□□□□□ -0.12
CCDC140-201ENST00000295226 AGKQ53H12 422 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 C6orf15Q6UXA7 325 aaPredicted RBP14.27□□□□□ -0.12
CCDC140-201ENST00000295226 LAPTM4BQ86VI4 370 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 FUNDC1Q8IVP5 155 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 SCUBE1Q8IWY4 988 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 STMN2Q93045 179 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 ASCL3Q9NQ33 180 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 IFT80Q9P2H3 777 aaPredicted RBP14.27□□□□□ -0.12
CCDC140-201ENST00000295226 PHF11Q9UIL8 331 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 WASF3Q9UPY6 502 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 MAP4K5Q9Y4K4 846 aa14.27□□□□□ -0.12
CCDC140-201ENST00000295226 PSMD12O00232 456 aaPredicted RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 BRINP1O60477 761 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 CNOT3O75175 753 aaKnown RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 FURINP09958 794 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 NR2F6P10588 404 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 PIM1P11309 404 aaPredicted RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 AGXTP21549 392 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 ZFP36L2P47974 494 aaKnown RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 EFNA3P52797 238 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 DGKQP52824 942 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 TRA2BP62995 288 aaKnown RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 TNFRSF17Q02223 184 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 KLF10Q13118 480 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 UGT8Q16880 541 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 PGS1Q32NB8 556 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 ZNF385BQ569K4 471 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 MFSD4BQ5TF39 518 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 GK5Q6ZS86 529 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 TICAM1Q8IUC6 712 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 ZC3H7AQ8IWR0 971 aaKnown RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 RIMKLAQ8IXN7 391 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 CPSF7Q8N684 471 aaKnown RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 TBC1D20Q96BZ9 403 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 REEP4Q9H6H4 257 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 RPF2Q9H7B2 306 aaKnown RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 SH3BP4Q9P0V3 963 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 STOML1Q9UBI4 398 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 PCDHA9Q9Y5H5 950 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 CDRT15L2A8MXV6 281 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 LDB3O75112 727 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 BMP10O95393 424 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 ANP32DO95626 131 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 C8orf89P0DMQ9 161 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 LAMP1P11279 417 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 GCKP35557 465 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 ASMTP46597 345 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 NIPAL1Q6NVV3 410 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 OVCH1Q7RTY7 1134 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 EXOSC8Q96B26 276 aaKnown RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 LRFN5Q96NI6 719 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 FAIM2Q9BWQ8 316 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 NRSN2Q9GZP1 204 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 SOX17Q9H6I2 414 aaPredicted RBP14.26□□□□□ -0.13
CCDC140-201ENST00000295226 NDE1Q9NXR1 346 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 PADI1Q9ULC6 663 aa14.26□□□□□ -0.13
CCDC140-201ENST00000295226 ASPMQ8IZT6 3477 aa14.25□□□□□ -0.13
CCDC140-201ENST00000295226 SCAMP2O15127 329 aaKnown RBP14.25□□□□□ -0.13
CCDC140-201ENST00000295226 GUCY1B2O75343 617 aa14.25□□□□□ -0.13
CCDC140-201ENST00000295226 ERAL1O75616 437 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms