RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 H3BM21 787 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 WWP2O00308 870 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 SHOXO15266 292 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 SCGB1D2O95969 90 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 CKMT1AP12532 417 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 CSF2RAP15509 400 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 FPR1P21462 350 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 SPINT3P49223 89 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 MESP2Q0VG99 397 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 MED22Q15528 200 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 DGUOKQ16854 277 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 EXOC3L2Q2M3D2 409 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 ARSIQ5FYB1 569 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 ZNF697Q5TEC3 545 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 SZRD1Q7Z422 152 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 UBE2J2Q8N2K1 259 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 CDK5RAP1Q96SZ6 601 aaKnown RBP12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 PKP4Q99569 1192 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 WFDC6Q9BQY6 131 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 TM9SF3Q9HD45 589 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 SPASTQ9UBP0 616 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 EXO1Q9UQ84 846 aaKnown RBP12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 MGAT4DA6NG13 374 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 K7ESM1 405 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 TNFRSF11BO00300 401 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 KPNA4O00629 521 aaPredicted RBP12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 SCAMP1O15126 338 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 AQP9O43315 295 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 SUV39H1O43463 412 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 PRKAR1AP10644 381 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 MAGEA2P43356 314 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 DEFB103AP81534 67 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 HIST2H2ACQ16777 129 aaPredicted RBP12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 TIGD6Q17RP2 521 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 CPTPQ5TA50 214 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 CAPN13Q6MZZ7 669 aaPredicted RBP12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 AGTRAPQ6RW13 159 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 KRT74Q7RTS7 529 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 VANGL1Q8TAA9 524 aaPredicted RBP12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 UCN3Q969E3 161 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 C7orf34Q96L11 122 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 APOL4Q9BPW4 351 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 MRPL17Q9NRX2 175 aaKnown RBP12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 CREBZFQ9NS37 354 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 ERVK13-1Q9NX77 482 aa12.69□□□□□ -0.38
KCNIP3-201ENST00000295225 ABLIM3O94929 683 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 PCSK2P16519 638 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 AZGP1P25311 298 aaKnown RBP12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 CD40LGP29965 261 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 SLC6A12P48065 614 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 GABARAPL2P60520 117 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 ELAVL2Q12926 359 aaKnown RBP12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 RGNQ15493 299 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 MINDY4Q4G0A6 757 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 STEAP3Q658P3 488 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 TMEM215Q68D42 235 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 MZT2AQ6P582 158 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 C22orf39Q6P5X5 142 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 GGHQ92820 318 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 DEFB118Q96PH6 123 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 SLC46A2Q9BY10 475 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 MROQ9BYG7 248 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 C11orf16Q9NQ32 467 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 NDUFAF4Q9P032 175 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 RAB23Q9ULC3 237 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 MAN2B2Q9Y2E5 1009 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 CHTOPQ9Y3Y2 248 aaKnown RBP12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 PCM1Q15154 2024 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 LEFTY1O75610 366 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 RFPL2O75678 378 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 PRPS2P11908 318 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 TGM1P22735 817 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 CCINQ13939 588 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 IQCCQ4KMZ1 466 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 USP45Q70EL2 814 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 CBLL1Q75N03 491 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 RNF130Q86XS8 419 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 CAPNS2Q96L46 248 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 GLRX2Q9NS18 164 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 DOCK9Q9BZ29 2069 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 OR2A25A4D2G3 310 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 CTDSP2O14595 271 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 GATCO43716 136 aaKnown RBP12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 EPHB3P54753 998 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 PPIGQ13427 754 aaKnown RBP eCLIP12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 SYTL3Q4VX76 610 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 RBM45Q8IUH3 476 aaKnown RBP12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 OR7G3Q8NG95 312 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 LHFPL5Q8TAF8 219 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 ASZ1Q8WWH4 475 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 RASSF5Q8WWW0 418 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 TTC9Q92623 222 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 RAB8BQ92930 207 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 OMA1Q96E52 524 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 MAP6Q96JE9 813 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 RDH12Q96NR8 316 aa12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 EXOSC4Q9NPD3 245 aaKnown RBP12.68□□□□□ -0.38
KCNIP3-201ENST00000295225 MS4A12Q9NXJ0 267 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms