RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 ALDH4A1P30038 563 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 HOXD11P31277 338 aaPredicted RBP9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 SOX11P35716 441 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 PIGAP37287 484 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 MRPL19P49406 292 aaKnown RBP9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 RAB28P51157 221 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 ISL1P61371 349 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 VBP1P61758 197 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 PPP2R2BQ00005 443 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 EMX1Q04741 257 aaPredicted RBP9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 VAC14Q08AM6 782 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 DOC2AQ14183 400 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 SIM2Q14190 667 aaPredicted RBP9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 CARTPTQ16568 116 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 GLYATQ6IB77 296 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 TUBA3EQ6PEY2 450 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 WASH2PQ6VEQ5 465 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 FKBP9P1Q75LS8 142 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 ZNF438Q7Z4V0 828 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 GATAD2AQ86YP4 633 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 SLC25A45Q8N413 288 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 POC5Q8NA72 575 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 SH3KBP1Q96B97 665 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 TMEM74Q96NL1 305 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 NTMT1Q9BV86 223 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 SGPP1Q9BX95 441 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 OSBPL10Q9BXB5 764 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 KIR3DX1Q9H7L2 352 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 MARCH7Q9H992 704 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 WASH6PQ9NQA3 447 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 POLG2Q9UHN1 485 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 LEF1Q9UJU2 399 aaPredicted RBP9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 USP22Q9UPT9 525 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 CARD8Q9Y2G2 431 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 SCN3AQ9NY46 2000 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 CNOT1A5YKK6 2376 aaKnown RBP9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 SEC16AO15027 2179 aa9.24□□□□□ -0.93
LRTOMT-201ENST00000289488 CLDN9O95484 217 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 UROSP10746 265 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 ERGP11308 486 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 HGFP14210 728 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PEBP1P30086 187 aaKnown RBP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 KRT6CP48668 564 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 OR4D2P58180 307 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PPP1CAP62136 330 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 LSM3P62310 102 aaKnown RBP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 HMGCS1Q01581 520 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 IRF8Q02556 426 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 EMX2Q04743 252 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 KCNAB2Q13303 367 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 SHBQ15464 509 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 FAM98BQ52LJ0 330 aaKnown RBP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PAGE3Q5JUK9 113 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 ZNF691Q5VV52 312 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 IL27RAQ6UWB1 636 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 TRIM48Q8IWZ4 208 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 ZBTB44Q8NCP5 570 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 FAM174AQ8TBP5 190 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 LCN9Q8WX39 176 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 TUBGCP3Q96CW5 907 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PPM1MQ96MI6 270 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 MTERF1Q99551 399 aaKnown RBP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 ZSCAN32Q9NX65 697 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 OSGIN1Q9UJX0 560 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 GPR45Q9Y5Y3 372 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 COLEC10Q9Y6Z7 277 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 DCHS1Q96JQ0 3298 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 IGKV1-8A0A0C4DH67 115 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PTGES3LE9PB15 166 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 H7BY64 318 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 TAF4O00268 1085 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 BTN3A3O00478 584 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PPM1DO15297 605 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 VPS4BO75351 444 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PIAS2O75928 621 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 EBLN1P0CF75 366 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 GNSP15586 552 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PKLRP30613 574 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 CTSKP43235 329 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 ZFP36L2P47974 494 aaKnown RBP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 TRPC1P48995 793 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 HNRNPKP61978 463 aaKnown RBP eCLIP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 CHRNB3Q05901 458 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 GRIK2Q13002 908 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 DDX39BQ13838 428 aaKnown RBP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 ELOCQ15369 112 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PRAMEF13Q5VWM6 474 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 RSBN1Q5VWQ0 802 aaPredicted RBP9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 STEAP3Q658P3 488 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 TCEAL6Q6IPX3 200 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 SLCO4C1Q6ZQN7 724 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PAGE2Q7Z2X7 111 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 BMP8AQ7Z5Y6 402 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 PLD3Q8IV08 490 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 SVOPLQ8N434 492 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 OR10G6Q8NH81 332 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 FBLIM1Q8WUP2 373 aa9.23□□□□□ -0.93
LRTOMT-201ENST00000289488 TCEAL3Q969E4 200 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms