RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 SAXO2Q658L1 398 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 CCDC71Q8IV32 467 aaPredicted RBP18.3■□□□□ 0.52
BRAF-201ENST00000288602 KNL1Q8NG31 2342 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 LZICQ8WZA0 190 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 FEVQ99581 238 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 RSPO3Q9BXY4 272 aaPredicted RBP18.3■□□□□ 0.52
BRAF-201ENST00000288602 DGCR6LQ9BY27 220 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 A0A1W2PS29 197 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 ANGPTL1O95841 491 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 CRB2Q5IJ48 1285 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 GPR153Q6NV75 609 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 FAHD1Q6P587 224 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 CCDC80Q76M96 950 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 OLIG3Q7RTU3 272 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 B3GNT8Q7Z7M8 397 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 ERI1Q8IV48 349 aaKnown RBP18.3■□□□□ 0.52
BRAF-201ENST00000288602 MS4A6EQ96DS6 147 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 NEURL3Q96EH8 262 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 NRBF2Q96F24 287 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 SCARF2Q96GP6 870 aaPredicted RBP18.3■□□□□ 0.52
BRAF-201ENST00000288602 ZNF300Q96RE9 604 aaPredicted RBP18.3■□□□□ 0.52
BRAF-201ENST00000288602 FBXW2Q9UKT8 454 aa18.3■□□□□ 0.52
BRAF-201ENST00000288602 H3BMQ9 156 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 H3BQ06 376 aaPredicted RBP18.29■□□□□ 0.52
BRAF-201ENST00000288602 PGRMC2O15173 223 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 MAN1A2O60476 641 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 ERAL1O75616 437 aaKnown RBP18.29■□□□□ 0.52
BRAF-201ENST00000288602 SERPINB1P30740 379 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 GRSF1Q12849 480 aaKnown RBP eCLIP18.29■□□□□ 0.52
BRAF-201ENST00000288602 NPRL3Q12980 569 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 SLAMF1Q13291 335 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 SLC5A8Q8N695 610 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 OR5D16Q8NGK9 328 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 LCN9Q8WX39 176 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 COG8Q96MW5 612 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 GDF15Q99988 308 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 RAB11FIP5Q9BXF6 653 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 PITHD1Q9GZP4 211 aaPredicted RBP18.29■□□□□ 0.52
BRAF-201ENST00000288602 ZNF624Q9P2J8 865 aaPredicted RBP18.29■□□□□ 0.52
BRAF-201ENST00000288602 ANGPT4Q9Y264 503 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 BTN3A3O00478 584 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 RASGRP1O95267 797 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 C8orf89P0DMQ9 161 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 ACTR1BP42025 376 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 TPMTP51580 245 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 ACTR1AP61163 376 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 SNRPNP63162 240 aaKnown RBP18.29■□□□□ 0.52
BRAF-201ENST00000288602 RPP38P78345 283 aaKnown RBP18.29■□□□□ 0.52
BRAF-201ENST00000288602 EXOC3L2Q2M3D2 409 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 OR13F1Q8NGS4 319 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 TMEM19Q96HH6 336 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 MSLNLQ96KJ4 702 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 GLIPR2Q9H4G4 154 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 RAD21L1Q9H4I0 556 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 SERHL2Q9H4I8 314 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 NDRG4Q9ULP0 352 aaKnown RBP18.29■□□□□ 0.52
BRAF-201ENST00000288602 ATG4BQ9Y4P1 393 aa18.29■□□□□ 0.52
BRAF-201ENST00000288602 ARHGEF17Q96PE2 2063 aaPredicted RBP18.28■□□□□ 0.52
BRAF-201ENST00000288602 FOXD2O60548 495 aaPredicted RBP18.28■□□□□ 0.52
BRAF-201ENST00000288602 RECKO95980 971 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 POU2F1P14859 743 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 CCT3P49368 545 aaKnown RBP18.28■□□□□ 0.52
BRAF-201ENST00000288602 IL18R1Q13478 541 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 ZIC1Q15915 447 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 TOR1AIP1Q5JTV8 583 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 C18orf63Q68DL7 685 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 REEP3Q6NUK4 255 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 HMGN2P46Q86SG4 172 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 AMIGO1Q86WK6 493 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 OR9Q2Q8NGE9 314 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 GIPC3Q8TF64 312 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 ZBED6CLQ96FA7 236 aaPredicted RBP18.28■□□□□ 0.52
BRAF-201ENST00000288602 NIPSNAP1Q9BPW8 284 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 CD207Q9UJ71 328 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 GON4LQ3T8J9 2241 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 TCRBV21S2A2A0A5A6 115 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 HMGN4O00479 90 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 PCDH17O14917 1159 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 ADAMDEC1O15204 470 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 VIPP01282 170 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 CERS1P27544 350 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 DCKP27707 260 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 FRKP42685 505 aaPredicted RBP18.28■□□□□ 0.52
BRAF-201ENST00000288602 PRKAG1P54619 331 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 DYNC1I2Q13409 638 aaKnown RBP18.28■□□□□ 0.52
BRAF-201ENST00000288602 KEAP1Q14145 624 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 ACOT4Q8N9L9 421 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 FBLIM1Q8WUP2 373 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 NEUROD4Q9HD90 331 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 PRDM7Q9NQW5 492 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 BLOC1S6Q9UL45 172 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 COLEC10Q9Y6Z7 277 aa18.28■□□□□ 0.52
BRAF-201ENST00000288602 A0A1W2PPW3 197 aa18.27■□□□□ 0.52
BRAF-201ENST00000288602 C5orf58C9J3I9 102 aa18.27■□□□□ 0.52
BRAF-201ENST00000288602 KCNJ13O60928 360 aa18.27■□□□□ 0.52
BRAF-201ENST00000288602 CHRM5P08912 532 aaPredicted RBP18.27■□□□□ 0.52
BRAF-201ENST00000288602 NR4A1P22736 598 aa18.27■□□□□ 0.52
BRAF-201ENST00000288602 GSTM2P28161 218 aa18.27■□□□□ 0.52
BRAF-201ENST00000288602 GPC1P35052 558 aa18.27■□□□□ 0.52
BRAF-201ENST00000288602 DUSP2Q05923 314 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms