RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 C8orf33Q9H7E9 229 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 TMEM184CQ9NVA4 438 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 TAS2R9Q9NYW1 312 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ANKMY1Q9P2S6 941 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 WBP11Q9Y2W2 641 aaKnown RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 DYRK1BQ9Y463 629 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 R4GN57 208 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 NEDD8-MDP1E9PL57 170 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 H3BM21 787 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 LEFTY1O75610 366 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 CYP17A1P05093 508 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ETFAP13804 333 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 NPPBP16860 134 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 RHCEP18577 417 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 XPAP23025 273 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 SERPINB1P30740 379 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 S100A5P33763 92 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 SLC19A1P41440 591 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 TMED10P49755 219 aaKnown RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 EIF2B2P49770 351 aaKnown RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 CTSCP53634 463 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 CDC42P60953 191 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 SF1Q15637 639 aaKnown RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 SYT16Q17RD7 645 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF658BQ4V348 819 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 BCL7AQ4VC05 210 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF385BQ569K4 471 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 FAM71E1Q6IPT2 247 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 PNCKQ6P2M8 343 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 COMMD6Q7Z4G1 85 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 TMPRSS11BQ86T26 416 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 CCDC103Q8IW40 242 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 METTL4Q8N3J2 472 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 STX19Q8N4C7 294 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 PSMA8Q8TAA3 256 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF480Q8WV37 535 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 PROX1Q92786 737 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 EFHD2Q96C19 240 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ZCCHC2Q9C0B9 1178 aaKnown RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 DMRT3Q9NQL9 472 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 IMPAD1Q9NX62 359 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ZNF226Q9NYT6 803 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 TBC1D14Q9P2M4 693 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ICKQ9UPZ9 632 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ANGPT4Q9Y264 503 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 MRPS17Q9Y2R5 130 aaKnown RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 FAM32AQ9Y421 112 aaKnown RBP12.32□□□□□ -0.44
C9orf3-201ENST00000277198 PCDHGA3Q9Y5H0 932 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 PEX16Q9Y5Y5 336 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 ATG2BQ96BY7 2078 aa12.32□□□□□ -0.44
C9orf3-201ENST00000277198 PNMA8CA0A1B0GUJ8 204 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 CACNB4O00305 520 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-201ENST00000277198 C6orf47O95873 294 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 PTTG1O95997 202 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 EGFP01133 1207 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ADORA3P0DMS8 318 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ARAFP10398 606 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 DDX5P17844 614 aaKnown RBP12.31□□□□□ -0.44
C9orf3-201ENST00000277198 GADD45AP24522 165 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ETV6P41212 452 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 BDKRB1P46663 353 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 PREPP48147 710 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 IDH2P48735 452 aaKnown RBP12.31□□□□□ -0.44
C9orf3-201ENST00000277198 RGS6P49758 472 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 CDH12P55289 794 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 TBPL1P62380 186 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 CCINQ13939 588 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 PDGFRLQ15198 375 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 EXOC3L2Q2M3D2 409 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 INAVAQ3KP66 663 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 CCSMST1Q4G0I0 132 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ARSIQ5FYB1 569 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 CATSPEREQ5SY80 951 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ERAP2Q6P179 960 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 C19orf48Q6RUI8 117 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ANGPTL8Q6UXH0 198 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ARMCX6Q7L4S7 300 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 SLC22A16Q86VW1 577 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 C12orf40Q86WS4 652 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 LYSMD2Q8IV50 215 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 GPR156Q8NFN8 814 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 AP2M1Q96CW1 435 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 PRRX2Q99811 253 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 CHRDQ9H2X0 955 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ZBTB20Q9HC78 741 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-201ENST00000277198 INIPQ9NRY2 104 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ACER3Q9NUN7 267 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 SCHIP1Q9P0W5 487 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-201ENST00000277198 IL36AQ9UHA7 158 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 MKLN1Q9UL63 735 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 ENPP4Q9Y6X5 453 aa12.31□□□□□ -0.44
C9orf3-201ENST00000277198 RIF1Q5UIP0 2472 aaKnown RBP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 MYOFQ9NZM1 2061 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 KDM1AO60341 852 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 CCNB2O95067 398 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 SP9P0CG40 484 aa12.3□□□□□ -0.44
C9orf3-201ENST00000277198 PIPP12273 146 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-201ENST00000277198 TYRP14679 529 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms