RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 AMDHD1Q96NU7 426 aa21.16■□□□□ 0.98
SIX3-201ENST00000260653 GLIPR2Q9H4G4 154 aa21.16■□□□□ 0.98
SIX3-201ENST00000260653 UCK1Q9HA47 277 aa21.16■□□□□ 0.98
SIX3-201ENST00000260653 LYARQ9NX58 379 aaKnown RBP21.16■□□□□ 0.98
SIX3-201ENST00000260653 PI4KAP42356 2102 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 CCDC163A0A0D9SF12 145 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 A0A1W2PS29 197 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 PDLIM1O00151 329 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 UQCRBP14927 111 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 AQP1P29972 269 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 PTGER1P34995 402 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 DHPSP49366 369 aaPredicted RBP21.15■□□□□ 0.98
SIX3-201ENST00000260653 SIGLEC14Q08ET2 396 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 FADDQ13158 208 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 KLHL35Q6PF15 583 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 OGFOD3Q6PK18 319 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 ZBTB49Q6ZSB9 765 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 PRSS41Q7RTY9 318 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 C11orf65Q8NCR3 313 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 KLHL6Q8WZ60 621 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 BTBD9Q96Q07 612 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 C1GALT1Q9NS00 363 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 URADA6NGE7 173 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 B4GALT2O60909 372 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 DNAJB6O75190 326 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 KRT75O95678 551 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 PCGF2P35227 344 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 VSX2P58304 361 aaPredicted RBP21.15■□□□□ 0.98
SIX3-201ENST00000260653 RPS26P62854 115 aaKnown RBP21.15■□□□□ 0.98
SIX3-201ENST00000260653 BNIP3Q12983 259 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 C14orf28Q4W4Y0 310 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 GCNT6Q5T4J0 391 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 LYSMD4Q5XG99 296 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 SLC48A1Q6P1K1 146 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 SDR16C5Q8N3Y7 309 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 C19orf47Q8N9M1 422 aaKnown RBP21.15■□□□□ 0.98
SIX3-201ENST00000260653 CNRIP1Q96F85 164 aaPredicted RBP21.15■□□□□ 0.98
SIX3-201ENST00000260653 VPS50Q96JG6 964 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.15■□□□□ 0.98
SIX3-201ENST00000260653 PRMT8Q9NR22 394 aaPredicted RBP21.15■□□□□ 0.98
SIX3-201ENST00000260653 STARD5Q9NSY2 213 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 TMEM74BQ9NUR3 256 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 CES1P1Q9UKY3 287 aa21.15■□□□□ 0.98
SIX3-201ENST00000260653 PCDH15Q96QU1 1955 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 SLC9B1P1A6NJY1 282 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 CLOCKO15516 846 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 C8orf89P0DMQ9 161 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 TDGF1P13385 188 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 NTSP30990 170 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 NCBP2P52298 156 aaKnown RBP eCLIP21.14■□□□□ 0.98
SIX3-201ENST00000260653 FOLH1Q04609 750 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 DUSP2Q05923 314 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 ABHD13Q7L211 337 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 CBR4Q8N4T8 237 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 CSNK1A1LQ8N752 337 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 PYURFQ96I23 114 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 BBS4Q96RK4 519 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 MAP3K3Q99759 626 aa21.14■□□□□ 0.98
SIX3-201ENST00000260653 SAMD4AQ9UPU9 718 aaKnown RBP21.14■□□□□ 0.98
SIX3-201ENST00000260653 SPTBP11277 2137 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 ARID1BQ8NFD5 2236 aaPredicted RBP21.14■□□□□ 0.97
SIX3-201ENST00000260653 A0A0C4DFX4 3053 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 ASXL3Q9C0F0 2248 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 ZNF860A6NHJ4 632 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 TXNDC9O14530 226 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 CTSBP07858 339 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 PPM1FP49593 454 aaPredicted RBP21.14■□□□□ 0.97
SIX3-201ENST00000260653 CRYBA2P53672 197 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 VAC14Q08AM6 782 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 SAXO2Q658L1 398 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 FAM92BQ6ZTR7 304 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 EID3Q8N140 333 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 NEURL3Q96EH8 262 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 SERINC2Q96SA4 455 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 PADI4Q9UM07 663 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 BDP1A6H8Y1 2624 aa21.14■□□□□ 0.97
SIX3-201ENST00000260653 C7orf72A4D263 438 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 EIF4E1BA6NMX2 242 aaKnown RBP21.13■□□□□ 0.97
SIX3-201ENST00000260653 ZSCAN9O15535 394 aaPredicted RBP21.13■□□□□ 0.97
SIX3-201ENST00000260653 NR2F6P10588 404 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 ALPPL2P10696 532 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 ALOX12P18054 663 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 OLR1P78380 273 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 RUNX2Q13950 521 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 MLC1Q15049 377 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 SPDYE7PQ495Y7 208 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 PSMA8Q8TAA3 256 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 SUN3Q8TAQ9 357 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 CCDC3Q9BQI4 270 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 ROGDIQ9GZN7 287 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 MAGIXQ9H6Y5 334 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 NTN4Q9HB63 628 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 KCMF1Q9P0J7 381 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 FEN1P39748 380 aaKnown RBP21.13■□□□□ 0.97
SIX3-201ENST00000260653 PRIM2P49643 509 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 SIM2Q14190 667 aaPredicted RBP21.13■□□□□ 0.97
SIX3-201ENST00000260653 TEAD4Q15561 434 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 TMEM214Q6NUQ4 689 aaKnown RBP21.13■□□□□ 0.97
SIX3-201ENST00000260653 SLC25A45Q8N413 288 aa21.13■□□□□ 0.97
SIX3-201ENST00000260653 ZNF655Q8N720 491 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms