RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 EME2A4GXA9 379 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-201ENST00000238688 OR6C74A6NCV1 312 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 H3BNX3 289 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 CLIC1O00299 241 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 HAT1O14929 419 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 YY2O15391 372 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 AKAP10O43572 662 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 IFI6P09912 130 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 ALPPL2P10696 532 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 LAMP1P11279 417 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 PIM1P11309 404 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-201ENST00000238688 TCN1P20061 433 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-201ENST00000238688 HSPA13P48723 471 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 MRPS22P82650 360 aaKnown RBP12.52□□□□□ -0.41
SLIRP-201ENST00000238688 RBBP4Q09028 425 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 ZC3H12BQ5HYM0 836 aaKnown RBP12.52□□□□□ -0.41
SLIRP-201ENST00000238688 PERM1Q5SV97 790 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 CPZQ66K79 652 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 MRM1Q6IN84 353 aaKnown RBP12.52□□□□□ -0.41
SLIRP-201ENST00000238688 ADNP2Q6IQ32 1131 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 GUSBP11Q6P575 273 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 FIGLAQ6QHK4 219 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 ABHD13Q7L211 337 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 GPR155Q7Z3F1 870 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 MSRB3Q8IXL7 192 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 SLC35F3Q8IY50 421 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 MICU2Q8IYU8 434 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 RNF175Q8N4F7 328 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 RNF148Q8N7C7 305 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 OR6C4Q8NGE1 309 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 WDR48Q8TAF3 677 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 IFI44Q8TCB0 444 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 OR5P2Q8WZ92 322 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 RERGQ96A58 199 aaPredicted RBP12.52□□□□□ -0.41
SLIRP-201ENST00000238688 MOAP1Q96BY2 351 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 F2RL3Q96RI0 385 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 TACO1Q9BSH4 297 aaKnown RBP12.52□□□□□ -0.41
SLIRP-201ENST00000238688 UGT2B28Q9BY64 529 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 SEMA6CQ9H3T2 930 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 MAGIXQ9H6Y5 334 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 ENAMQ9NRM1 1142 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 HRASLS2Q9NWW9 162 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 SH3BP4Q9P0V3 963 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 SLAMF8Q9P0V8 285 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 PILRAQ9UKJ1 303 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 PSME2Q9UL46 239 aa12.52□□□□□ -0.41
SLIRP-201ENST00000238688 AHCTF1Q8WYP5 2266 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 SMG1Q96Q15 3661 aaKnown RBP12.51□□□□□ -0.41
SLIRP-201ENST00000238688 FEZF1A0PJY2 475 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 GSAPA4D1B5 854 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 BLACEA4D250 179 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 GSTA4O15217 222 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 LCMT2O60294 686 aaKnown RBP12.51□□□□□ -0.41
SLIRP-201ENST00000238688 BRINP1O60477 761 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 SLITRK5O94991 958 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 LRATO95237 230 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 BAG2O95816 211 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 IL3P08700 152 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 ACADSP16219 412 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 ITPKBP27987 946 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 EIF2S3P41091 472 aaKnown RBP12.51□□□□□ -0.41
SLIRP-201ENST00000238688 GPR3P46089 330 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 CAPZBP47756 277 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 ANXA11P50995 505 aaKnown RBP12.51□□□□□ -0.41
SLIRP-201ENST00000238688 MTPNP58546 118 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 MUM1Q2TAK8 710 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 C6orf132Q5T0Z8 1188 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-201ENST00000238688 BHLHB9Q6PI77 547 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 PACRGLQ8N7B6 248 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 C7orf57Q8NEG2 295 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 TM4SF18Q96CE8 201 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 BTBD9Q96Q07 612 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 OR2A5Q96R48 311 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 SERINC2Q96SA4 455 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 ZNF184Q99676 751 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-201ENST00000238688 PCDHAC1Q9H158 963 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 COPS7BQ9H9Q2 264 aaPredicted RBP12.51□□□□□ -0.41
SLIRP-201ENST00000238688 TPT1P8Q9HAU6 139 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 C1GALT1Q9NS00 363 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 ANAPC2Q9UJX6 822 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 PACSIN3Q9UKS6 424 aa12.51□□□□□ -0.41
SLIRP-201ENST00000238688 A0A1W2PRB8 838 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 PDPK1O15530 556 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 ERI3O43414 337 aaKnown RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 NUDT21O43809 227 aaKnown RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 SRPX2O60687 465 aaPredicted RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 SORBS2O94875 1100 aaKnown RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 FAM58BPP0C7Q3 252 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 BMP2P12643 396 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 ATP6V1B2P21281 511 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 UQCRC2P22695 453 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 ATP5A1P25705 553 aaKnown RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 NTSP30990 170 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 GZMMP51124 257 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 DUSP3P51452 185 aaPredicted RBP12.5□□□□□ -0.41
SLIRP-201ENST00000238688 CLCN2P51788 898 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 EMP3P54852 163 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 CYP4F2P78329 520 aa12.5□□□□□ -0.41
SLIRP-201ENST00000238688 HYAL2Q12891 473 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms