RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ZNHIT1O43257 154 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 UGDHO60701 494 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 ABCB7O75027 752 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 EEDO75530 441 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 OR2J2O76002 312 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 CLDN9O95484 217 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 ETHE1O95571 254 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 SNRPAP09012 282 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 PTX3P26022 381 aaPredicted RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 GCAP28676 217 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 RFC3P40938 356 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 SSR4P51571 173 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 CCNG1P51959 295 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 HNRNPH2P55795 449 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 TEX35Q5T0J7 233 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 GPR180Q86V85 440 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 CYP4Z2PQ8N1L4 340 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 ARMC10Q8N2F6 343 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 MORN4Q8NDC4 146 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 WDR20Q8TBZ3 569 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 SLC2A12Q8TD20 617 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 DOK4Q8TEW6 326 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 PPWD1Q96BP3 646 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 GPR137Q96N19 417 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 RPF2Q9H7B2 306 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 PCTPQ9UKL6 214 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 ATG4BQ9Y4P1 393 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 SYNDIG1LA6NDD5 238 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 TMEM200CA6NKL6 621 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 STX16-NPEPL1H3BU86 382 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 WWP2O00308 870 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 STX16O14662 325 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 GBAP04062 536 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 FAM153BP0C7A2 387 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 COL6A2P12110 1019 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 TLX1P31314 330 aaPredicted RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 MEOX1P50221 254 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 GPR85P60893 370 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 HSF1Q00613 529 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 TNFRSF17Q02223 184 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 FAM153CQ494X1 144 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 RNFT1Q5M7Z0 435 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 FAM219BQ5XKK7 198 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 ZNF787Q6DD87 383 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 TTC19Q6DKK2 380 aaPredicted RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 METTL2BQ6P1Q9 378 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 CYP20A1Q6UW02 462 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 HSDL2Q6YN16 418 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 DGAT2L6Q6ZPD8 337 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 MDGA2Q7Z553 956 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 SIAH3Q8IW03 269 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 GSPT2Q8IYD1 628 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 RELTQ969Z4 430 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 MAGED4Q96JG8 741 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 DGAT2Q96PD7 388 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 MRPL57Q9BQC6 102 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 ZNF717Q9BY31 904 aaPredicted RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 MRPL46Q9H2W6 279 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 ZBTB26Q9HCK0 441 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 SEMA4BQ9NPR2 832 aaPredicted RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 PHF11Q9UIL8 331 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 TMCO1Q9UM00 188 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 ERVK-11Q9UQG0 969 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 YARS2Q9Y2Z4 477 aaKnown RBP13.23□□□□□ -0.29
GPN3-201ENST00000228827 TSC22D4Q9Y3Q8 395 aa13.23□□□□□ -0.29
GPN3-201ENST00000228827 GLOD5A6NK44 160 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 WASHC1A8K0Z3 465 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 A8MVJ9 347 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 CCL21O00585 134 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 CDK2AP1O14519 115 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 RIPK2O43353 540 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 PEX1O43933 1283 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 TMPRSS11DO60235 418 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 SLC19A2O60779 497 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 MLYCDO95822 493 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 ABHD2P08910 425 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 ZNF24P17028 368 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 TSPAN8P19075 237 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 BSGP35613 385 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 BUD31P41223 144 aaPredicted RBP13.22□□□□□ -0.29
GPN3-201ENST00000228827 FOLH1Q04609 750 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 C3AR1Q16581 482 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 SGO1Q5FBB7 561 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 LGSNQ5TDP6 509 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 IL20RBQ6UXL0 311 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 TRMT10CQ7L0Y3 403 aaKnown RBP13.22□□□□□ -0.29
GPN3-201ENST00000228827 SULF2Q8IWU5 870 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 ZCCHC7Q8N3Z6 543 aaKnown RBP13.22□□□□□ -0.29
GPN3-201ENST00000228827 LRRN4CLQ8ND94 238 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 ASB15Q8WXK1 588 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 HPF1Q9NWY4 346 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 MS4A12Q9NXJ0 267 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 TINAGQ9UJW2 476 aa13.22□□□□□ -0.29
GPN3-201ENST00000228827 KLF13Q9Y2Y9 288 aaPredicted RBP13.22□□□□□ -0.29
GPN3-201ENST00000228827 A0A0A6YYD5 115 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 ARHGAP10A1A4S6 786 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 A8MT66 165 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 FOXE1O00358 373 aaPredicted RBP13.21□□□□□ -0.3
GPN3-201ENST00000228827 PPP6CO00743 305 aa13.21□□□□□ -0.3
GPN3-201ENST00000228827 PROM1O43490 865 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms