RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SLC15A1P46059 708 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 RPS26P62854 115 aaKnown RBP16.46■□□□□ 0.23
USB1-201ENST00000219281 IFITM2Q01629 132 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 TMEM215Q68D42 235 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 CACTIN-AS1Q8N1I8 211 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 ZNF740Q8NDX6 193 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 ZNF486Q96H40 463 aaPredicted RBP16.46■□□□□ 0.23
USB1-201ENST00000219281 HHATLQ9HCP6 504 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 ASAH2Q9NR71 780 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 CRNNQ9UBG3 495 aaPredicted RBP16.46■□□□□ 0.23
USB1-201ENST00000219281 GULP1Q9UBP9 304 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 CLEC2DQ9UHP7 191 aa16.46■□□□□ 0.23
USB1-201ENST00000219281 TLR4O00206 839 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 MOSPD3O75425 235 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 CYP7B1O75881 506 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 CCNKO75909 580 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 SOX14O95416 240 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 RSBN1Q5VWQ0 802 aaPredicted RBP16.45■□□□□ 0.22
USB1-201ENST00000219281 CHAC2Q8WUX2 184 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 WDR34Q96EX3 536 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 ASPNQ9BXN1 380 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 CXorf36Q9H7Y0 433 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 SLC25A19Q9HC21 320 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 NEK6Q9HC98 313 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 SMURF1Q9HCE7 757 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 TAAR2Q9P1P5 351 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 ITM2BQ9Y287 266 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 A0A075B6Q4 140 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 ARRDC5A6NEK1 342 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 RGS5O15539 181 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 SCG5P05408 212 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 RPS19P39019 145 aaKnown RBP16.45■□□□□ 0.22
USB1-201ENST00000219281 BCL7AQ4VC05 210 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 REEP3Q6NUK4 255 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 CEACAM20Q6UY09 585 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 UTS2BQ765I0 119 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 VANGL1Q8TAA9 524 aaPredicted RBP16.45■□□□□ 0.22
USB1-201ENST00000219281 SLC5A11Q8WWX8 675 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 NLNQ9BYT8 704 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 MOV10Q9HCE1 1003 aaKnown RBP16.45■□□□□ 0.22
USB1-201ENST00000219281 MIEF1Q9NQG6 463 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 DNAJC27Q9NZQ0 273 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 IRAK3Q9Y616 596 aa16.45■□□□□ 0.22
USB1-201ENST00000219281 H3BQ06 376 aaPredicted RBP16.44■□□□□ 0.22
USB1-201ENST00000219281 TYRP14679 529 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 CD72P21854 359 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 UQCRC2P22695 453 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 MAPK9P45984 424 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 COPZ1P61923 177 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 GRIN2CQ14957 1233 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 SEC23BQ15437 767 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 AGAP6Q5VW22 663 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 TNFAIP8L2Q6P589 184 aaPredicted RBP16.44■□□□□ 0.22
USB1-201ENST00000219281 NXPE4Q6UWF7 544 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 WDR53Q7Z5U6 358 aaPredicted RBP16.44■□□□□ 0.22
USB1-201ENST00000219281 SLC34A3Q8N130 599 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 MRPL43Q8N983 215 aaKnown RBP16.44■□□□□ 0.22
USB1-201ENST00000219281 ARMC5Q96C12 935 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 AGAP4Q96P64 663 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 CCDC32Q9BV29 185 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 SGPP1Q9BX95 441 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 UCK2Q9BZX2 261 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 LINC00597Q9H2U6 94 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 TP63Q9H3D4 680 aaPredicted RBP16.44■□□□□ 0.22
USB1-201ENST00000219281 REV1Q9UBZ9 1251 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 KCND3Q9UK17 655 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 TBC1D24Q9ULP9 559 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 TMCC3Q9ULS5 477 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 HELZP42694 1942 aaKnown RBP16.44■□□□□ 0.22
USB1-201ENST00000219281 ALPK3Q96L96 1907 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 PCM1Q15154 2024 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 C5orf58C9J3I9 102 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 CSO75390 466 aaKnown RBP16.44■□□□□ 0.22
USB1-201ENST00000219281 BCHEP06276 602 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 ELFN1P0C7U0 828 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 PIPP12273 146 aaPredicted RBP16.44■□□□□ 0.22
USB1-201ENST00000219281 OSMP13725 252 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 CSTF2P33240 577 aaKnown RBP eCLIP16.44■□□□□ 0.22
USB1-201ENST00000219281 TIE1P35590 1138 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 ALDH9A1P49189 494 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 OR2B6P58173 313 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 TAP2Q03519 686 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.44■□□□□ 0.22
USB1-201ENST00000219281 TMC5Q6UXY8 1006 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 LIPIQ6XZB0 460 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 DPPA4Q7L190 304 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 HORMAD2Q8N7B1 307 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 FLCNQ8NFG4 579 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 MTERF3Q96E29 417 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 BARHL1Q9BZE3 327 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 NFKBIL1Q9UBC1 381 aaPredicted RBP16.44■□□□□ 0.22
USB1-201ENST00000219281 INSL6Q9Y581 213 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 DSPPQ9NZW4 1301 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 PLXNA2O75051 1894 aa16.44■□□□□ 0.22
USB1-201ENST00000219281 SLITRK5O94991 958 aa16.43■□□□□ 0.22
USB1-201ENST00000219281 TCEA1P23193 301 aaKnown RBP16.43■□□□□ 0.22
USB1-201ENST00000219281 RHAGQ02094 409 aa16.43■□□□□ 0.22
USB1-201ENST00000219281 TEAD2Q15562 447 aa16.43■□□□□ 0.22
USB1-201ENST00000219281 PLPP4Q5VZY2 271 aa16.43■□□□□ 0.22
USB1-201ENST00000219281 BCDIN3DQ7Z5W3 292 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms