RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 DPH7Q9BTV6 452 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 ABCG4Q9H172 646 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 KIR3DX1Q9H7L2 352 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 LHX9Q9NQ69 397 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 GIMAP4Q9NUV9 329 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 P2RX2Q9UBL9 471 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 PNMA8BQ9ULN7 279 aaPredicted RBP7.85□□□□□ -1.15
VAMP3-201ENST00000054666 ENTPD4Q9Y227 616 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 ZNF451Q9Y4E5 1061 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 PLEKHM1Q9Y4G2 1056 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 ENPP4Q9Y6X5 453 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 PLXND1Q9Y4D7 1925 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 IGKV1-8A0A0C4DH67 115 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 A0A1W2PPW3 197 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 A0A1W2PQF6 199 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 LRIT2A6NDA9 550 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 ZNF99A8MXY4 864 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 ISM1B1AKI9 464 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 TMEM229AB2RXF0 380 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 HAT1O14929 419 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SCAMP1O15126 338 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 RGS10O43665 173 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 LCMT2O60294 686 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 MRPS14O60783 128 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 ADAM23O75077 832 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 CCNB2O95067 398 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 GADD45GO95257 159 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 EGFP01133 1207 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 CDK4P11802 303 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 RHCEP18577 417 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 COL9A1P20849 921 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 MATN1P21941 496 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 XCR1P46094 333 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 CCT3P49368 545 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 KHKP50053 298 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 MAPK10P53779 464 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 RPS26P62854 115 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 CSNK2BP67870 215 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SLC35A2P78381 396 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 MVKQ03426 396 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 PIGFQ07326 219 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 NFATC4Q14934 902 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 MLC1Q15049 377 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 MICAQ29983 383 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 LAIR2Q6ISS4 152 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 GPR153Q6NV75 609 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 BHLHB9Q6PI77 547 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 DHRS4L2Q6PKH6 230 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 ENPP7Q6UWV6 458 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 KIAA1324Q6UXG2 1013 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 C6orf120Q7Z4R8 191 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 DEPDC4Q8N2C3 294 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 TMEM145Q8NBT3 493 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 OR4C15Q8NGM1 316 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 FAM81AQ8TBF8 368 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 HRASLS5Q96KN8 279 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 WDR92Q96MX6 357 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 TEFMQ96QE5 360 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 FEVQ99581 238 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 NAA50Q9GZZ1 169 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 S1PR5Q9H228 398 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SLC6A20Q9NP91 592 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 RASSF1Q9NS23 344 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SEMA3GQ9NS98 782 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 PAK1IP1Q9NWT1 392 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 OR6C2Q9NZP2 312 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 C5orf42Q9H799 3197 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 PRAMEF33A0A0G2JMD5 474 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 PRR19A6NJB7 356 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SLC28A2O43868 658 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 PRAMEF10O60809 474 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 NDUFS2O75306 463 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SERPINB7O75635 380 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 BCL10O95999 233 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 HOXC4P09017 264 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 DRD1P21728 446 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 HIST1H1TP22492 207 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 KRT20P35900 424 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 TSFMP43897 325 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 GSSP48637 474 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 NCBP2P52298 156 aaKnown RBP eCLIP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 ARFIP1P53367 373 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 STXBP1P61764 594 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 HPCAP84074 193 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 NFATC3Q12968 1075 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 ADAM15Q13444 863 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 HTR4Q13639 388 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 GANABQ14697 944 aaKnown RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 NPTX1Q15818 432 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 CYP27C1Q4G0S4 372 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 RPS26P11Q5JNZ5 115 aaPredicted RBP7.84□□□□□ -1.15
VAMP3-201ENST00000054666 TOR1AIP1Q5JTV8 583 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 GTF2IRD2BQ6EKJ0 949 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 CCDC81Q6ZN84 652 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 UBE3DQ7Z6J8 389 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 GTF2IRD2Q86UP8 949 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 AMIGO1Q86WK6 493 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 KRT73Q86Y46 540 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 SLC5A8Q8N695 610 aa7.84□□□□□ -1.15
VAMP3-201ENST00000054666 OR2L5Q8NG80 312 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms