RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 OSGIN2Q9Y236 505 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 SLC5A6Q9Y289 635 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 PKDREJQ9NTG1 2253 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 TCRBV16S1A1N1A0A5B0 115 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 LRIT2A6NDA9 550 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 OR5H15A6NDH6 313 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 A8MUI8 341 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 MAGEB17A8MXT2 336 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 CYR61O00622 381 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 LRRTM2O43300 516 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ZNF354AO60765 605 aaPredicted RBP7.34□□□□□ -1.23
PNKP-229ENST00000637897 ZG16O60844 167 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 B4GALT2O60909 372 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 DNAJC8O75937 253 aaPredicted RBP7.34□□□□□ -1.23
PNKP-229ENST00000637897 DDAH2O95865 285 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 FHP07954 510 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 CYC1P08574 325 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 HIST1H2AGP0C0S8 130 aaPredicted RBP7.34□□□□□ -1.23
PNKP-229ENST00000637897 SLC35E2BP0CK96 405 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 C1GALT1C1LP0DN25 315 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 MTHFD2P13995 350 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 PRF1P14222 555 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 HIST1H2ADP20671 130 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 CXCR2P25025 360 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 AGTR2P50052 363 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 RAB10P61026 200 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ARG2P78540 354 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 OCRLQ01968 901 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 BST1Q10588 318 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ASPHQ12797 758 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 SF3A3Q12874 501 aaKnown RBP eCLIP7.34□□□□□ -1.23
PNKP-229ENST00000637897 CSHL1Q14406 222 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 PCLAFQ15004 111 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ABRAXAS2Q15018 415 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 NSDHLQ15738 373 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 BTBD16Q32M84 506 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ADPRMQ3LIE5 342 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 C4orf17Q53FE4 359 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ACER2Q5QJU3 275 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 PAPD4Q6PIY7 484 aaKnown RBP7.34□□□□□ -1.23
PNKP-229ENST00000637897 ZNF793Q6ZN11 406 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 C16orf47Q6ZP98 133 aaPredicted RBP7.34□□□□□ -1.23
PNKP-229ENST00000637897 CMC1Q7Z7K0 106 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ISCA2Q86U28 154 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 SIAH3Q8IW03 269 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 SCUBE1Q8IWY4 988 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ARMC10Q8N2F6 343 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 RNF175Q8N4F7 328 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 NKAPQ8N5F7 415 aaKnown RBP7.34□□□□□ -1.23
PNKP-229ENST00000637897 APCDD1LQ8NCL9 501 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 M1APQ8TC57 530 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 TBC1D20Q96BZ9 403 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 MS4A6EQ96DS6 147 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 WDR34Q96EX3 536 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 HIST1H2AHQ96KK5 128 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 OR1F2PQ96R84 312 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ATOH8Q96SQ7 321 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 CSF3RQ99062 836 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 HIST1H2AJQ99878 128 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 H2AFJQ9BTM1 129 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 MECRQ9BV79 373 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 SLC29A3Q9BZD2 475 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 NMRAL1Q9HBL8 299 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 STMN3Q9NZ72 180 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 TMEM216Q9P0N5 145 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 PTBP2Q9UKA9 531 aaKnown RBP7.34□□□□□ -1.23
PNKP-229ENST00000637897 ACOT9Q9Y305 439 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 ABCA12Q86UK0 2595 aa7.34□□□□□ -1.23
PNKP-229ENST00000637897 EML6Q6ZMW3 1958 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 TRAV17A0A0B4J275 112 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 MYOCOSA0A1B0GUC4 107 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 ASPDHA6ND91 283 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 CFAP73A6NFT4 308 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 LRRC14BA6NHZ5 514 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 NCF1BA6NI72 391 aaPredicted RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 NCF1CA8MVU1 366 aaPredicted RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 TMEM114B3SHH9 223 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 ANKRD65E5RJM6 399 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 H0YHG0 523 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 KLHL41O60662 606 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 PRAMEF2O60811 474 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 HNRNPCL1O60812 293 aaKnown RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 WFS1O76024 890 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 UBOX5O94941 541 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 WDR47O94967 919 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 SNUPNO95149 360 aaKnown RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 SERPIND1P05546 499 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 SERPINA6P08185 405 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 SLC35G6P0C7Q6 338 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 CCDC166P0CW27 439 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 MYL2P10916 166 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 NCF1P14598 390 aaPredicted RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 GRNP28799 593 aaKnown RBP7.33□□□□□ -1.24
PNKP-229ENST00000637897 SLC1A6P48664 564 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 HSPA7P48741 367 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 ARFIP2P53365 341 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 IRF9Q00978 393 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 ZNF33BQ06732 778 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 BNIP1Q12981 228 aa7.33□□□□□ -1.24
PNKP-229ENST00000637897 SLBPQ14493 270 aaKnown RBP eCLIP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms