RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 THAP11Q96EK4 314 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 ASPSCR1Q9BZE9 553 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 DPY30Q9C005 99 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 TMED5Q9Y3A6 229 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 PCDHA9Q9Y5H5 950 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 SDK2Q58EX2 2172 aa18.14■□□□□ 0.49
CNOT9-209ENST00000627282 H0YIV9 168 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 NME4O00746 187 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 ZSCAN9O15535 394 aaPredicted RBP18.13■□□□□ 0.49
CNOT9-209ENST00000627282 BCKDHAP12694 445 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 ACPPP15309 386 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 HKDC1Q2TB90 917 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 PRTGQ2VWP7 1150 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 PAGE2BQ5JRK9 111 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 TCTE1Q5JU00 501 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 RNF111Q6ZNA4 994 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 VN1R5Q7Z5H4 357 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 DHDDSQ86SQ9 333 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 KRT78Q8N1N4 520 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 ZNF655Q8N720 491 aaPredicted RBP18.13■□□□□ 0.49
CNOT9-209ENST00000627282 CSNK1A1LQ8N752 337 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 WDR20Q8TBZ3 569 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 RERGQ96A58 199 aaPredicted RBP18.13■□□□□ 0.49
CNOT9-209ENST00000627282 TM4SF19Q96DZ7 209 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 TEFMQ96QE5 360 aaKnown RBP18.13■□□□□ 0.49
CNOT9-209ENST00000627282 MACROD1Q9BQ69 325 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 ZPBPQ9BS86 351 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 B3GNT4Q9C0J1 378 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 PITHD1Q9GZP4 211 aaPredicted RBP18.13■□□□□ 0.49
CNOT9-209ENST00000627282 NT5DC2Q9H857 520 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 CMTM6Q9NX76 183 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 AP1M2Q9Y6Q5 423 aa18.13■□□□□ 0.49
CNOT9-209ENST00000627282 FITM1A5D6W6 292 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 KLK10O43240 276 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 SCRG1O75711 98 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 HSD17B1P14061 328 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 MAPK1P28482 360 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 AHRP35869 848 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 GCGRP47871 477 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 SNRPNP63162 240 aaKnown RBP18.12■□□□□ 0.49
CNOT9-209ENST00000627282 CYP4F2P78329 520 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 LAPTM5Q13571 262 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 CAPRIN1Q14444 709 aaKnown RBP18.12■□□□□ 0.49
CNOT9-209ENST00000627282 TMEM164Q5U3C3 297 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 GPR135Q8IZ08 494 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 FAM9CQ8IZT9 166 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 TBC1D19Q8N5T2 526 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 TMEM125Q96AQ2 219 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 CRELD1Q96HD1 420 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 FCRL1Q96LA6 429 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 SPRY4Q9C004 299 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 PCDHAC1Q9H158 963 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 NMRK1Q9NWW6 199 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 IRAK4Q9NWZ3 460 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 ZNF749O43361 778 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 HSD3B1P14060 373 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 HSD3B2P26439 372 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 PTGR1Q14914 329 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 CMPK2Q5EBM0 449 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 MED27Q6P2C8 311 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 TLDC1Q6P9B6 456 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 SLC2A7Q6PXP3 512 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 ASPGQ86U10 573 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 TMEM126BQ8IUX1 230 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 LAS2Q8IYD9 372 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 ARHGEF39Q8N4T4 335 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 SLC38A9Q8NBW4 561 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 OR7G3Q8NG95 312 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 CREB3L4Q8TEY5 395 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 SLC13A3Q8WWT9 602 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 RHBGQ9H310 441 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 RUVBL1Q9Y265 456 aaKnown RBP18.12■□□□□ 0.49
CNOT9-209ENST00000627282 SSUH2Q9Y2M2 353 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 PCDHB3Q9Y5E6 796 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 PCDHGA11Q9Y5H2 935 aa18.12■□□□□ 0.49
CNOT9-209ENST00000627282 FER1L5A0AVI2 2057 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 C15orf38-AP3S2A0A0A6YYH1 394 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 MED26O95402 600 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 TBX6O95947 436 aaPredicted RBP18.11■□□□□ 0.49
CNOT9-209ENST00000627282 NTRK1P04629 796 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 IL6P05231 212 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 C8BP07358 591 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 CLDN8P56748 225 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 MRPS22P82650 360 aaKnown RBP18.11■□□□□ 0.49
CNOT9-209ENST00000627282 CLN3Q13286 438 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 TAF11Q15544 211 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 HIST2H2ACQ16777 129 aaPredicted RBP18.11■□□□□ 0.49
CNOT9-209ENST00000627282 C6orf10Q5SRN2 563 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 HIST2H2AA3Q6FI13 130 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 ARPINQ7Z6K5 226 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 DNAJC9Q8WXX5 260 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 METTL2AQ96IZ6 378 aaKnown RBP18.11■□□□□ 0.49
CNOT9-209ENST00000627282 C10orf90Q96M02 699 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 ULBP3Q9BZM4 244 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 CLMPQ9H6B4 373 aa18.11■□□□□ 0.49
CNOT9-209ENST00000627282 C6orf203Q9P0P8 240 aaPredicted RBP18.11■□□□□ 0.49
CNOT9-209ENST00000627282 NDUFS4O43181 175 aa18.1■□□□□ 0.49
CNOT9-209ENST00000627282 STK17BO94768 372 aa18.1■□□□□ 0.49
CNOT9-209ENST00000627282 DGKQP52824 942 aa18.1■□□□□ 0.49
CNOT9-209ENST00000627282 EEFSECP57772 596 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms