RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 THAP11Q96EK4 314 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 KIFC1Q9BW19 673 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 TP63Q9H3D4 680 aaPredicted RBP7.32□□□□□ -1.24
CLK1-215ENST00000621181 SYBUQ9NX95 663 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 KCNN3Q9UGI6 736 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 RNF6Q9Y252 685 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 C15orf41Q9Y2V0 281 aa7.32□□□□□ -1.24
CLK1-215ENST00000621181 TCRBV9S1A1TA0A576 114 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 NDUFS4O43181 175 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 B4GALT2O60909 372 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PDE9AO76083 593 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 TOXO94900 526 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 ANP32DO95626 131 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 FHP07954 510 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 ENO3P13929 434 aaPredicted RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 PHBP35232 272 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 MAGEA3P43357 314 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 IST1P53990 364 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 GPR85P60893 370 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 MPP1Q00013 466 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 TFF3Q07654 80 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PMPCAQ10713 525 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 DEFB134Q4QY38 66 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 ZNF470Q6ECI4 717 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 CASC4Q6P4E1 433 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 CAPN12Q6ZSI9 719 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 UBE2R2Q712K3 238 aaPredicted RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 C17orf64Q86WR6 236 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 SULF2Q8IWU5 870 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 LRRC56Q8IYG6 542 aaPredicted RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 MMP21Q8N119 569 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 TMEM156Q8N614 296 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 OR5M3Q8NGP4 307 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 GIMAP7Q8NHV1 300 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 TCP10LQ8TDR4 215 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 LRRC8CQ8TDW0 803 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 CCDC138Q96M89 665 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 LRRC37BQ96QE4 947 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 SLC30A3Q99726 388 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PRR14Q9BWN1 585 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PCBD2Q9H0N5 130 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 CXorf56Q9H5V9 222 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 SAR1AQ9NR31 198 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 LANCL2Q9NS86 450 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 INTS10Q9NVR2 710 aaKnown RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 SLC17A7Q9P2U7 560 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 SLC22A7Q9Y694 548 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 FAM221AA4D161 298 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 GFYI3L273 518 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PEX11AO75192 247 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PIAS1O75925 651 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 DCTN3O75935 186 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 TGDSO95455 350 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 HOXD4P09016 255 aaPredicted RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 GNAZP19086 355 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 TFEBP19484 476 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 ELK3P41970 407 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 HLCSP50747 726 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 MLF1P58340 268 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 BBS9Q3SYG4 887 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 CMPK2Q5EBM0 449 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 HHATQ5VTY9 493 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 FAM91A1Q658Y4 838 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 KIAA0930Q6ICG6 404 aaPredicted RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 NEPROQ6NW34 567 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 CAND1Q86VP6 1230 aaKnown RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 ZNF227Q86WZ6 799 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 CCDC71Q8IV32 467 aaPredicted RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 CLYBLQ8N0X4 340 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PDIK1LQ8N165 341 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 CYP4Z2PQ8N1L4 340 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 RPRMLQ8N4K4 120 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 ZNF740Q8NDX6 193 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 KCNJ9Q92806 393 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 TM4SF19Q96DZ7 209 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PTCD3Q96EY7 689 aaKnown RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 PTCHD1Q96NR3 888 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PAIP2Q9BPZ3 127 aaKnown RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 DEFB126Q9BYW3 111 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 C12orf65Q9H3J6 166 aaKnown RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 TRIM45Q9H8W5 580 aaPredicted RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 SOX13Q9UN79 622 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 HRH3Q9Y5N1 445 aa7.31□□□□□ -1.24
CLK1-215ENST00000621181 PHF3Q92576 2039 aaKnown RBP7.31□□□□□ -1.24
CLK1-215ENST00000621181 ZNF469Q96JG9 3925 aaPredicted RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 SAGE2PA6NJ88 616 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 KLF11O14901 512 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 PEX1O43933 1283 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 LCMT2O60294 686 aaKnown RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 SERPIND1P05546 499 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 F7P08709 466 aaPredicted RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 MPC1LP0DKB6 136 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 CDH1P12830 882 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 HOXB4P17483 251 aaPredicted RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 KLK2P20151 261 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 MAOAP21397 527 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 ALDH3A1P30838 453 aa7.3□□□□□ -1.24
CLK1-215ENST00000621181 TRHRP34981 398 aaPredicted RBP7.3□□□□□ -1.24
CLK1-215ENST00000621181 OLR1P78380 273 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms