RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 HUS1BQ8NHY5 278 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 DAZLQ92904 295 aaKnown RBP23.52■■□□□ 1.36
VEGFA-227ENST00000615393 ISL2Q96A47 359 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 REPS1Q96D71 796 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 MAPKAP1Q9BPZ7 522 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 TSC22D4Q9Y3Q8 395 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 CLCA3PQ9Y6N3 262 aa23.52■■□□□ 1.36
VEGFA-227ENST00000615393 KRT38O76015 456 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 RBP1P09455 135 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 CNTFP26441 200 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 ECHS1P30084 290 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 MAGEA12P43365 314 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 RAP1GDS1P52306 607 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 ALDH6A1Q02252 535 aaKnown RBP23.51■■□□□ 1.35
VEGFA-227ENST00000615393 GTF2H2Q13888 395 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 TECRLQ5HYJ1 363 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 GTF2H2CQ6P1K8 395 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 KIF18AQ8NI77 898 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 THAP3Q8WTV1 239 aaPredicted RBP23.51■■□□□ 1.35
VEGFA-227ENST00000615393 RELTQ969Z4 430 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 RGMAQ96B86 450 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 FRMD6Q96NE9 622 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 ALOXE3Q9BYJ1 711 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 OR51B5Q9H339 312 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 VTI1BQ9UEU0 232 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 TMCO1Q9UM00 188 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 NBPF19A0A087WUL8 3843 aa23.51■■□□□ 1.35
VEGFA-227ENST00000615393 POLEQ07864 2286 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 ICE1Q9Y2F5 2266 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 SAP18O00422 153 aaKnown RBP23.5■■□□□ 1.35
VEGFA-227ENST00000615393 NME2P1O60361 137 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 ZFAND5O76080 213 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 NME2P22392 152 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 CPN2P22792 545 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 GPR143P51810 404 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 TSNAXIP1Q2TAA8 658 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 OR4C11Q6IEV9 310 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 GOLGA7Q7Z5G4 137 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.5■■□□□ 1.35
VEGFA-227ENST00000615393 PLD6Q8N2A8 252 aaKnown RBP23.5■■□□□ 1.35
VEGFA-227ENST00000615393 TMEM156Q8N614 296 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 OR14A16Q8NHC5 309 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 IPPKQ9H8X2 491 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 DMRT3Q9NQL9 472 aa23.5■■□□□ 1.35
VEGFA-227ENST00000615393 ZNF223Q9UK11 482 aaPredicted RBP23.5■■□□□ 1.35
VEGFA-227ENST00000615393 A0A087WUV0 522 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-227ENST00000615393 TRGV8A0A0C4DH27 118 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 LRRC14BA6NHZ5 514 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 POC1B-GALNT4F8VUJ3 575 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 H0YIV9 168 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 ITGA10O75578 1167 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 KRTCAP3Q53RY4 240 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 CEP112Q8N8E3 955 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 MORN4Q8NDC4 146 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 SCYL1Q96KG9 808 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 GPR137Q96N19 417 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 MTERF1Q99551 399 aaKnown RBP23.49■■□□□ 1.35
VEGFA-227ENST00000615393 MS4A12Q9NXJ0 267 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 ZNF180Q9UJW8 692 aa23.49■■□□□ 1.35
VEGFA-227ENST00000615393 ZG16O60844 167 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 LDB3O75112 727 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 SIX3O95343 332 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-227ENST00000615393 COL6A2P12110 1019 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 TNNI3P19429 210 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 PTX3P26022 381 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-227ENST00000615393 ARFIP1P53367 373 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 CASP6P55212 293 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 SLAMF1Q13291 335 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 ZRSR2Q15696 482 aaKnown RBP23.48■■□□□ 1.35
VEGFA-227ENST00000615393 CPSF6Q16630 551 aaKnown RBP eCLIP23.48■■□□□ 1.35
VEGFA-227ENST00000615393 ZNF227Q86WZ6 799 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 RNF175Q8N4F7 328 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 PTGR2Q8N8N7 351 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-227ENST00000615393 L3MBTL4Q8NA19 623 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 ZNF358Q9NW07 568 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 SUCOQ9UBS9 1254 aaKnown RBP23.48■■□□□ 1.35
VEGFA-227ENST00000615393 PHF11Q9UIL8 331 aa23.48■■□□□ 1.35
VEGFA-227ENST00000615393 KLF13Q9Y2Y9 288 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-227ENST00000615393 YARS2Q9Y2Z4 477 aaKnown RBP23.48■■□□□ 1.35
VEGFA-227ENST00000615393 SPTAN1Q13813 2472 aaKnown RBP23.48■■□□□ 1.35
VEGFA-227ENST00000615393 SMIM24O75264 130 aa23.47■■□□□ 1.35
VEGFA-227ENST00000615393 ARL1P40616 181 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-227ENST00000615393 SSR4P51571 173 aa23.47■■□□□ 1.35
VEGFA-227ENST00000615393 RPS13P62277 151 aaKnown RBP23.47■■□□□ 1.35
VEGFA-227ENST00000615393 HSDL2Q6YN16 418 aa23.47■■□□□ 1.35
VEGFA-227ENST00000615393 CYP4Z2PQ8N1L4 340 aa23.47■■□□□ 1.35
VEGFA-227ENST00000615393 ZCCHC7Q8N3Z6 543 aaKnown RBP23.47■■□□□ 1.35
VEGFA-227ENST00000615393 UHMK1Q8TAS1 419 aaKnown RBP23.47■■□□□ 1.35
VEGFA-227ENST00000615393 PTPMT1Q8WUK0 201 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-227ENST00000615393 ATP6V1E2Q96A05 226 aa23.47■■□□□ 1.35
VEGFA-227ENST00000615393 PHF21BQ96EK2 531 aa23.47■■□□□ 1.35
VEGFA-227ENST00000615393 SORBS1Q9BX66 1292 aaKnown RBP23.47■■□□□ 1.35
VEGFA-227ENST00000615393 XPR1Q9UBH6 696 aa23.47■■□□□ 1.35
VEGFA-227ENST00000615393 UTP20O75691 2785 aaKnown RBP23.46■■□□□ 1.35
VEGFA-227ENST00000615393 MYOCOSA0A1B0GUC4 107 aa23.46■■□□□ 1.35
VEGFA-227ENST00000615393 C17orf105B2RV13 164 aa23.46■■□□□ 1.35
VEGFA-227ENST00000615393 TRIM49D1C9J1S8 452 aa23.46■■□□□ 1.35
VEGFA-227ENST00000615393 NPIPA5E9PKD4 350 aa23.46■■□□□ 1.35
VEGFA-227ENST00000615393 STX16-NPEPL1H3BU86 382 aa23.46■■□□□ 1.35
VEGFA-227ENST00000615393 PLPP1O14494 284 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms