RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TXLNGYQ9BZA5 131 aa18■□□□□ 0.47
SGMS1-208ENST00000608287 ZNF700Q9H0M5 742 aa18■□□□□ 0.47
SGMS1-208ENST00000608287 RHBGQ9H310 441 aa18■□□□□ 0.47
SGMS1-208ENST00000608287 LANCL2Q9NS86 450 aa18■□□□□ 0.47
SGMS1-208ENST00000608287 SCN2AQ99250 2005 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 IGHV3-20A0A0C4DH32 117 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 LRRC14BA6NHZ5 514 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 KLK8O60259 260 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 B4GALT2O60909 372 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 SEC24DO94855 1032 aaPredicted RBP17.99■□□□□ 0.47
SGMS1-208ENST00000608287 PCNAP12004 261 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 KLK2P20151 261 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 JAK1P23458 1154 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 DNAJA1P31689 397 aaKnown RBP17.99■□□□□ 0.47
SGMS1-208ENST00000608287 HPDP32754 393 aaPredicted RBP17.99■□□□□ 0.47
SGMS1-208ENST00000608287 CASP2P42575 452 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 CDSNQ15517 529 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 MED27Q6P2C8 311 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 ADGRD1Q6QNK2 874 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 CPEB2Q7Z5Q1 589 aaKnown RBP17.99■□□□□ 0.47
SGMS1-208ENST00000608287 ANKRD37Q7Z713 158 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 MYLK4Q86YV6 388 aaPredicted RBP17.99■□□□□ 0.47
SGMS1-208ENST00000608287 GHDCQ8N2G8 530 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 EIF1ADQ8N9N8 165 aaKnown RBP17.99■□□□□ 0.47
SGMS1-208ENST00000608287 UBE2E3Q969T4 207 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 REXO4Q9GZR2 422 aaKnown RBP17.99■□□□□ 0.47
SGMS1-208ENST00000608287 CLK4Q9HAZ1 481 aaKnown RBP17.99■□□□□ 0.47
SGMS1-208ENST00000608287 STMN3Q9NZ72 180 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 XPR1Q9UBH6 696 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 KCNN3Q9UGI6 736 aa17.99■□□□□ 0.47
SGMS1-208ENST00000608287 TNPO3Q9Y5L0 923 aaKnown RBP17.99■□□□□ 0.47
SGMS1-208ENST00000608287 ABCA4P78363 2273 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 A0A088AWK7 358 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 FAM227AF5H4B4 570 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 PSMD12O00232 456 aaPredicted RBP17.98■□□□□ 0.47
SGMS1-208ENST00000608287 F10P00742 488 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 RNH1P13489 461 aaKnown RBP17.98■□□□□ 0.47
SGMS1-208ENST00000608287 ZNF10P21506 573 aaPredicted RBP17.98■□□□□ 0.47
SGMS1-208ENST00000608287 PLA2G16P53816 162 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 RHAGQ02094 409 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 ZNF33BQ06732 778 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 E2F2Q14209 437 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 ABRAXAS2Q15018 415 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 PCBP2Q15366 365 aaKnown RBP eCLIP17.98■□□□□ 0.476e-9■■■■■ 37.8
SGMS1-208ENST00000608287 NSDHLQ15738 373 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 TRIM40Q6P9F5 258 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 PTGR2Q8N8N7 351 aaPredicted RBP17.98■□□□□ 0.47
SGMS1-208ENST00000608287 PLPP5Q8NEB5 264 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 OR2L5Q8NG80 312 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 ASB5Q8WWX0 329 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 MTBPQ96DY7 904 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 PHF21BQ96EK2 531 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 TUBB6Q9BUF5 446 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 GTF3C1Q12789 2109 aa17.98■□□□□ 0.47
SGMS1-208ENST00000608287 IQANK1A0A1B0GTG1 560 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 SMIM24O75264 130 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 SIX3O95343 332 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-208ENST00000608287 TBX6O95947 436 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-208ENST00000608287 CELA2AP08217 269 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 ACTN3Q08043 901 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-208ENST00000608287 PCDH1Q08174 1060 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 GTF2H2Q13888 395 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 ADPRMQ3LIE5 342 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 GTF2H2CQ6P1K8 395 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 GOLGA7Q7Z5G4 137 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 CA13Q8N1Q1 262 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 AMER2Q8N7J2 671 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 TMEM178AQ8NBL3 297 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 AGAP11Q8TF27 550 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 UBLCP1Q8WVY7 318 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-208ENST00000608287 TSLPQ969D9 159 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 F2RL3Q96RI0 385 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 CCDC77Q9BR77 488 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 EPB41L4BQ9H329 900 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 ACTR8Q9H981 624 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 COPS7BQ9H9Q2 264 aaPredicted RBP17.97■□□□□ 0.47
SGMS1-208ENST00000608287 TMCO1Q9UM00 188 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 PPT2Q9UMR5 302 aa17.97■□□□□ 0.47
SGMS1-208ENST00000608287 MAGEB17A8MXT2 336 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 B3GALT2O43825 422 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 PRMT3O60678 531 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 IGFBP2P18065 325 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 EEF1DP29692 281 aaKnown RBP17.96■□□□□ 0.47
SGMS1-208ENST00000608287 PIK3CGP48736 1102 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 IST1P53990 364 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 PMP22Q01453 160 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 TGM3Q08188 693 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 SFT2D3Q587I9 215 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 GRHL2Q6ISB3 625 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 TIFABQ6ZNK6 161 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 LAS2Q8IYD9 372 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 HORMAD2Q8N7B1 307 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 OR7G3Q8NG95 312 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 ZNF473Q8WTR7 871 aaKnown RBP17.96■□□□□ 0.47
SGMS1-208ENST00000608287 IMMP1LQ96LU5 166 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 PTCHD1Q96NR3 888 aa17.96■□□□□ 0.47
SGMS1-208ENST00000608287 MRPL57Q9BQC6 102 aaKnown RBP17.96■□□□□ 0.47
SGMS1-208ENST00000608287 NPLQ9BXD5 320 aaPredicted RBP17.96■□□□□ 0.47
SGMS1-208ENST00000608287 MRPL46Q9H2W6 279 aaKnown RBP17.96■□□□□ 0.47
SGMS1-208ENST00000608287 IPPKQ9H8X2 491 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms