RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 IDO1P14902 403 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 ACPPP15309 386 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 TIA1P31483 386 aaKnown RBP eCLIP11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 TSFMP43897 325 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 RAB8AP61006 207 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 TBL3Q12788 808 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 HYAL2Q12891 473 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 C16orf72Q14CZ0 275 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 HERC3Q15034 1050 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 GSTA3Q16772 222 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 PRTGQ2VWP7 1150 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 RFTN2Q52LD8 501 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 CCNYL2Q5T2Q4 361 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 GARNL3Q5VVW2 1013 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 TMEM214Q6NUQ4 689 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 NIPAL1Q6NVV3 410 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 NOXRED1Q6NXP6 359 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 CYP20A1Q6UW02 462 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 FAM9CQ8IZT9 166 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 CDC26Q8NHZ8 85 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 CHTF18Q8WVB6 975 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 MARK4Q96L34 752 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 ZNF285Q96NJ3 590 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 NDC1Q9BTX1 674 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 EBPLQ9BY08 206 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 KLHL31Q9H511 634 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 ANKHQ9HCJ1 492 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 SIDT1Q9NXL6 827 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 ASIC5Q9NY37 505 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 ADAM29Q9UKF5 820 aa11.41□□□□□ -0.58
SHKBP1-213ENST00000597325 ANKHD1Q8IWZ3 2542 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 A0A0G2JN53 185 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 FITM1A5D6W6 292 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 K7EM74 188 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 RTCAO00442 366 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 TBX6O95947 436 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 LDLRP01130 860 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 KLK1P06870 262 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 ANXA4P09525 319 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 PRPS2P11908 318 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 LIFP15018 202 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 PCSK2P16519 638 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 ALOX12P18054 663 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 MAPK12P53778 367 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 ARSFP54793 590 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 EMP3P54852 163 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 MTTPP55157 894 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 BTN3A2P78410 334 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 ZNF763Q0D2J5 394 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 SQLEQ14534 574 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 MUM1Q2TAK8 710 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 FAM214AQ32MH5 1076 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 DEFB134Q4QY38 66 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 YOD1Q5VVQ6 348 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 IL23RQ5VWK5 629 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 TMEM198Q66K66 360 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 OR4C11Q6IEV9 310 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 ABHD17CQ6PCB6 329 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 BPHLQ86WA6 291 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 PPP1R3BQ86XI6 285 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 TMEM126BQ8IUX1 230 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 LIX1Q8N485 282 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 UTP15Q8TED0 518 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 NKD1Q969G9 470 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 ZNF501Q96CX3 271 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 LRRC37BQ96QE4 947 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 SERINC2Q96SA4 455 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 B3GNT4Q9C0J1 378 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 SPRTNQ9H040 489 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 AIG1Q9NVV5 245 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 SIRT5Q9NXA8 310 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 MCM8Q9UJA3 840 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 TP53TG5Q9Y2B4 290 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 SLC22A7Q9Y694 548 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 SVILO95425 2214 aa11.4□□□□□ -0.58
SHKBP1-213ENST00000597325 UNC13CQ8NB66 2214 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 FCHO1O14526 889 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 POLR1CO15160 346 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 B3GALT2O43825 422 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 GUCY1B2O75343 617 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 KLHL18O94889 574 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 ALDOCP09972 364 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 BCKDHAP12694 445 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 IL1RNP18510 177 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 SDC1P18827 310 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 HIST1H1TP22492 207 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 ATP5A1P25705 553 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 CERS1P27544 350 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 BSGP35613 385 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 GSTM5P46439 218 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 ASMTP46597 345 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 AVPR1BP47901 424 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 ATP4BP51164 291 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 DIO3P55073 304 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 IL11RAQ14626 422 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 SLC9A5Q14940 896 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 KIAA0040Q15053 153 aa11.39□□□□□ -0.59
SHKBP1-213ENST00000597325 TERF2Q15554 542 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms