RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 OR2L5Q8NG80 312 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 STT3BQ8TCJ2 826 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 SPSB2Q99619 263 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 MESP1Q9BRJ9 268 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 EFHD1Q9BUP0 239 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 PRORYQ9H606 182 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 SOX17Q9H6I2 414 aaPredicted RBP14.16□□□□□ -0.14
TRIM28-207ENST00000597136 AHSPQ9NZD4 102 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 HCN3Q9P1Z3 774 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 TRPC4Q9UBN4 977 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 HEY2Q9UBP5 337 aa14.16□□□□□ -0.14
TRIM28-207ENST00000597136 PTRH2Q9Y3E5 179 aaKnown RBP14.16□□□□□ -0.14
TRIM28-207ENST00000597136 TLN1Q9Y490 2541 aaKnown RBP14.16□□□□□ -0.14
TRIM28-207ENST00000597136 FAM208BQ5VWN6 2430 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 URADA6NGE7 173 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 VSTM2BA6NLU5 285 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 UBDO15205 165 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 ERI3O43414 337 aaKnown RBP14.15□□□□□ -0.14
TRIM28-207ENST00000597136 UMODP07911 640 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 ALDOCP09972 364 aaKnown RBP14.15□□□□□ -0.14
TRIM28-207ENST00000597136 PIM1P11309 404 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-207ENST00000597136 AVPR1BP47901 424 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 EFNA3P52797 238 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 ARFIP1P53367 373 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 UCNP55089 124 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 RPL38P63173 70 aaKnown RBP14.15□□□□□ -0.14
TRIM28-207ENST00000597136 RAE1P78406 368 aaKnown RBP14.15□□□□□ -0.14
TRIM28-207ENST00000597136 BTN3A2P78410 334 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 ABHD17CQ6PCB6 329 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 COMMD6Q7Z4G1 85 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 SPATA19Q7Z5L4 167 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 SRFBP1Q8NEF9 429 aaKnown RBP14.15□□□□□ -0.14
TRIM28-207ENST00000597136 GAL3ST3Q96A11 431 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 FCRL1Q96LA6 429 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 QRFPRQ96P65 431 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 KCNC2Q96PR1 638 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 C17orf62Q9BQA9 187 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 C1orf50Q9BV19 199 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 SORBS1Q9BX66 1292 aaKnown RBP14.15□□□□□ -0.14
TRIM28-207ENST00000597136 ZNF717Q9BY31 904 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-207ENST00000597136 SLC26A1Q9H2B4 701 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 SIRT5Q9NXA8 310 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 TRIM33Q9UPN9 1127 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 TMED5Q9Y3A6 229 aa14.15□□□□□ -0.14
TRIM28-207ENST00000597136 IGLV3-12A0A075B6K2 115 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 CDC14CA4D256 554 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 ZNF891A8MT65 544 aaPredicted RBP14.14□□□□□ -0.15
TRIM28-207ENST00000597136 H0YIG0 161 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 RTCAO00442 366 aaKnown RBP14.14□□□□□ -0.15
TRIM28-207ENST00000597136 ALBP02768 609 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 ZGLP1P0C6A0 271 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 BSGP35613 385 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 DIO3P55073 304 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 KLC1Q07866 573 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 TGM3Q08188 693 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 MAD2L1Q13257 205 aaPredicted RBP14.14□□□□□ -0.15
TRIM28-207ENST00000597136 RUNX2Q13950 521 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 HERC3Q15034 1050 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 TERF2Q15554 542 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 OR4C11Q6IEV9 310 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 NOXRED1Q6NXP6 359 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 GALNT18Q6P9A2 607 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 TRIM40Q6P9F5 258 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 ABHD13Q7L211 337 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 OR2Y1Q8NGV0 311 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 OR51Q1Q8NH59 317 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 SNRNP27Q8WVK2 155 aaKnown RBP14.14□□□□□ -0.15
TRIM28-207ENST00000597136 FKBP10Q96AY3 582 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 MARK4Q96L34 752 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 TBCDQ9BTW9 1192 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 PRDM7Q9NQW5 492 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 ASIC5Q9NY37 505 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 NOP53Q9NZM5 478 aaKnown RBP14.14□□□□□ -0.15
TRIM28-207ENST00000597136 ZNF282Q9UDV7 671 aaPredicted RBP14.14□□□□□ -0.15
TRIM28-207ENST00000597136 G3BP2Q9UN86 482 aaKnown RBP14.14□□□□□ -0.15
TRIM28-207ENST00000597136 DLGAP4Q9Y2H0 992 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 MAP4K5Q9Y4K4 846 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 PRRC2CQ9Y520 2896 aaKnown RBP14.14□□□□□ -0.15
TRIM28-207ENST00000597136 EML6Q6ZMW3 1958 aa14.14□□□□□ -0.15
TRIM28-207ENST00000597136 CHST10O43529 356 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 EEDO75530 441 aaKnown RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 KLK1P06870 262 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 BCKDHAP12694 445 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 ACPPP15309 386 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 NCF2P19878 526 aaPredicted RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 OCA2Q04671 838 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 IL23RQ5VWK5 629 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 ZNF793Q6ZN11 406 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 PAGE2Q7Z2X7 111 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 MTDHQ86UE4 582 aaKnown RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 ZC3H7AQ8IWR0 971 aaKnown RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 PARP9Q8IXQ6 854 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 ZSCAN1Q8NBB4 408 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 ADAMTS17Q8TE56 1095 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 MIEF2Q96C03 454 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 PEX11GQ96HA9 241 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 CATSPER2Q96P56 530 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 DDX31Q9H8H2 851 aaKnown RBP14.13□□□□□ -0.15
TRIM28-207ENST00000597136 ADAM29Q9UKF5 820 aa14.13□□□□□ -0.15
TRIM28-207ENST00000597136 EIF3LQ9Y262 564 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms