RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 KCNC2Q96PR1 638 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 F2RL3Q96RI0 385 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 MS4A8Q9BY19 250 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 ACSS3Q9H6R3 686 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 TRIM45Q9H8W5 580 aaPredicted RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 COPS7BQ9H9Q2 264 aaPredicted RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 PRDM7Q9NQW5 492 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 KLHL1Q9NR64 748 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 PRTFDC1Q9NRG1 225 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 SNX15Q9NRS6 342 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 NINJ2Q9NZG7 142 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 LRFN1Q9P244 771 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 OPTCQ9UBM4 332 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 PPIEQ9UNP9 301 aaKnown RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 MRPS33Q9Y291 106 aaKnown RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 ZNF407Q9C0G0 2248 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 A0A087X1B8 175 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 SYNDIG1LA6NDD5 238 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 SYCE1LA8MT33 242 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 MYO1DO94832 1006 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 UNC5CO95185 931 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 C2P06681 752 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 CD46P15529 392 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 EEF1DP29692 281 aaKnown RBP12.31□□□□□ -0.44
H3F3B-213ENST00000593254 TRHRP34981 398 aaPredicted RBP12.31□□□□□ -0.44
H3F3B-213ENST00000593254 MSH2P43246 934 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 KIR3DL1P43629 444 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 GPR143P51810 404 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 IRF9Q00978 393 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 OC90Q02509 493 aaPredicted RBP12.31□□□□□ -0.44
H3F3B-213ENST00000593254 TGM3Q08188 693 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 SLC13A2Q13183 592 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 CDSNQ15517 529 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 FAM83EQ2M2I3 478 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 UBAP2Q5T6F2 1119 aaKnown RBP12.31□□□□□ -0.44
H3F3B-213ENST00000593254 GALNTL5Q7Z4T8 443 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 UBE3DQ7Z6J8 389 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 ZNF227Q86WZ6 799 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 LAS2Q8IYD9 372 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 MMGT1Q8N4V1 131 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 ACBD4Q8NC06 268 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 SRFBP1Q8NEF9 429 aaKnown RBP12.31□□□□□ -0.44
H3F3B-213ENST00000593254 UBE2E3Q969T4 207 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 MRRFQ96E11 262 aaKnown RBP12.31□□□□□ -0.44
H3F3B-213ENST00000593254 CSF3RQ99062 836 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 FUT8Q9BYC5 575 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 DEFB126Q9BYW3 111 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 KCMF1Q9P0J7 381 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 SEC14L3Q9UDX4 400 aa12.31□□□□□ -0.44
H3F3B-213ENST00000593254 DMGDHQ9UI17 866 aaKnown RBP12.31□□□□□ -0.44
H3F3B-213ENST00000593254 ZNF223Q9UK11 482 aaPredicted RBP12.31□□□□□ -0.44
H3F3B-213ENST00000593254 EML6Q6ZMW3 1958 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 TRBV11-1A0A0K0K1C0 115 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 SLC25A12O75746 678 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 WISP2O76076 250 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 SCELO95171 688 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 KLHL2O95198 593 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 ALDOAP04075 364 aaKnown RBP12.3□□□□□ -0.44
H3F3B-213ENST00000593254 SP1P08047 785 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 EPB42P16452 691 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 PPP2R1BP30154 601 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 SERPINB1P30740 379 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 PHBP35232 272 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 CYB561P49447 251 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 CLCN2P51788 898 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 RCN2Q14257 317 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 SETDB1Q15047 1291 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 ACAP2Q15057 778 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 GRHL2Q6ISB3 625 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 SLC25A25Q6KCM7 469 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 MED27Q6P2C8 311 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 ZNF793Q6ZN11 406 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 CEP128Q6ZU80 1094 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 NOA1Q8NC60 698 aaKnown RBP12.3□□□□□ -0.44
H3F3B-213ENST00000593254 OR7G3Q8NG95 312 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 VMP1Q96GC9 406 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 FRMD6Q96NE9 622 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 GPR78Q96P69 363 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 SPOCK3Q9BQ16 436 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 TBCDQ9BTW9 1192 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 ROGDIQ9GZN7 287 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 MCCC2Q9HCC0 563 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 LYRM4Q9HD34 91 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 ADAP2Q9NPF8 381 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 RRAGDQ9NQL2 400 aaPredicted RBP12.3□□□□□ -0.44
H3F3B-213ENST00000593254 PNO1Q9NRX1 252 aaKnown RBP12.3□□□□□ -0.44
H3F3B-213ENST00000593254 MTRF1LQ9UGC7 380 aaKnown RBP12.3□□□□□ -0.44
H3F3B-213ENST00000593254 ABCA4P78363 2273 aa12.3□□□□□ -0.44
H3F3B-213ENST00000593254 A0A096LPK6 155 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 FCHO1O14526 889 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 KLK8O60259 260 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 ZNF500O60304 480 aaPredicted RBP12.29□□□□□ -0.44
H3F3B-213ENST00000593254 NME2P1O60361 137 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 CTNSO60931 367 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 CD1EP15812 388 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 NME2P22392 152 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 ATP5A1P25705 553 aaKnown RBP12.29□□□□□ -0.44
H3F3B-213ENST00000593254 SERPINB8P50452 374 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 HLCSP50747 726 aa12.29□□□□□ -0.44
H3F3B-213ENST00000593254 ALDH18A1P54886 795 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms